Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 BNA4YBL098W 1383 nt2.4□□□□□ -2.03
CDC39P25655 ALE1YOR175C 1860 nt2.39□□□□□ -2.03
CDC39P25655 ERG11YHR007C 1593 nt2.39□□□□□ -2.03
CDC39P25655 SPO71YDR104C 3738 nt2.39□□□□□ -2.03
CDC39P25655 BUD6YLR319C 2367 nt2.39□□□□□ -2.03
CDC39P25655 SLM2YNL047C 1971 nt2.39□□□□□ -2.03
CDC39P25655 NRP1YDL167C 2160 nt2.39□□□□□ -2.03
CDC39P25655 SKI8YGL213C 1194 nt2.39□□□□□ -2.03
CDC39P25655 COS6YGR295C 1146 nt2.39□□□□□ -2.03
CDC39P25655 ETP1YHL010C 1758 nt2.39□□□□□ -2.03
CDC39P25655 FLO10YKR102W 3510 nt2.39□□□□□ -2.03
CDC39P25655 ORC4YPR162C 1590 nt2.38□□□□□ -2.03
CDC39P25655 PHO12YHR215W 1404 nt2.38□□□□□ -2.03
CDC39P25655 PHO11YAR071W 1404 nt2.38□□□□□ -2.03
CDC39P25655 SMI1YGR229C 1518 nt2.38□□□□□ -2.03
CDC39P25655 DOS2YDR068W 933 nt2.38□□□□□ -2.03
CDC39P25655 DAL2YIR029W 1032 nt2.38□□□□□ -2.03
CDC39P25655 UPS2YLR168C 693 nt2.38□□□□□ -2.03
CDC39P25655 YLR257WYLR257W 966 nt2.38□□□□□ -2.03
CDC39P25655 MCA1YOR197W 1299 nt2.38□□□□□ -2.03
CDC39P25655 YPL073CYPL073C 486 nt2.38□□□□□ -2.03
CDC39P25655 YBR298C-AYBR298C-A 222 nt2.38□□□□□ -2.03
CDC39P25655 YGR067CYGR067C 2415 nt2.38□□□□□ -2.03
CDC39P25655 NPL4YBR170C 1743 nt2.38□□□□□ -2.03
CDC39P25655 INO2YDR123C 915 nt2.38□□□□□ -2.03
CDC39P25655 YOR238WYOR238W 912 nt2.38□□□□□ -2.03
CDC39P25655 MEK1YOR351C 1494 nt2.38□□□□□ -2.03
CDC39P25655 MYO3YKL129C 3819 nt2.37□□□□□ -2.03
CDC39P25655 NSP1YJL041W 2472 nt2.37□□□□□ -2.03
CDC39P25655 YAT2YER024W 2772 nt2.37□□□□□ -2.03
CDC39P25655 SET4YJL105W 1683 nt2.37□□□□□ -2.03
CDC39P25655 ALG1YBR110W 1350 nt2.37□□□□□ -2.03
CDC39P25655 MSB2YGR014W 3921 nt2.37□□□□□ -2.03
CDC39P25655 QCR10YHR001W-A 234 nt2.37□□□□□ -2.03
CDC39P25655 CDA2YLR308W 939 nt2.37□□□□□ -2.03
CDC39P25655 YLR347W-AYLR347W-A 141 nt2.37□□□□□ -2.03
CDC39P25655 YOR055WYOR055W 435 nt2.37□□□□□ -2.03
CDC39P25655 AXL1YPR122W 3627 nt2.37□□□□□ -2.03
CDC39P25655 CTR86YCR054C 1692 nt2.37□□□□□ -2.03
CDC39P25655 HDA2YDR295C 2025 nt2.36□□□□□ -2.03
CDC39P25655 MDM1YML104C 3384 nt2.36□□□□□ -2.03
CDC39P25655 PHO13YDL236W 939 nt2.36□□□□□ -2.03
CDC39P25655 YDR149CYDR149C 708 nt2.36□□□□□ -2.03
CDC39P25655 YHI9YHR029C 885 nt2.36□□□□□ -2.03
CDC39P25655 YLR124WYLR124W 345 nt2.36□□□□□ -2.03
CDC39P25655 TIS11YLR136C 858 nt2.36□□□□□ -2.03
CDC39P25655 YML037CYML037C 1023 nt2.36□□□□□ -2.03
CDC39P25655 FOL3YMR113W 1284 nt2.36□□□□□ -2.03
CDC39P25655 MIG1YGL035C 1515 nt2.36□□□□□ -2.03
CDC39P25655 HBT1YDL223C 3141 nt2.36□□□□□ -2.03
CDC39P25655 TRM13YOL125W 1431 nt2.36□□□□□ -2.03
CDC39P25655 PHO5YBR093C 1404 nt2.36□□□□□ -2.03
CDC39P25655 RPN3YER021W 1572 nt2.36□□□□□ -2.03
CDC39P25655 YGL262WYGL262W 528 nt2.36□□□□□ -2.03
CDC39P25655 EMC6YLL014W 327 nt2.36□□□□□ -2.03
CDC39P25655 RPS0BYLR048W 759 nt2.36□□□□□ -2.03
CDC39P25655 RUF21RUF21 707 nt2.36□□□□□ -2.03
CDC39P25655 YNL143CYNL143C 393 nt2.36□□□□□ -2.03
CDC39P25655 SMP3YOR149C 1551 nt2.36□□□□□ -2.03
CDC39P25655 SPO1YNL012W 1896 nt2.35□□□□□ -2.03
CDC39P25655 SEC15YGL233W 2733 nt2.35□□□□□ -2.03
CDC39P25655 NAM9YNL137C 1461 nt2.35□□□□□ -2.03
CDC39P25655 FLO11YIR019C 4104 nt2.35□□□□□ -2.03
CDC39P25655 CPR7YJR032W 1182 nt2.35□□□□□ -2.03
CDC39P25655 YOL107WYOL107W 1029 nt2.35□□□□□ -2.03
CDC39P25655 SIN3YOL004W 4611 nt2.34□□□□□ -2.03
CDC39P25655 YDR431WYDR431W 312 nt2.34□□□□□ -2.03
CDC39P25655 THP2YHR167W 786 nt2.34□□□□□ -2.03
CDC39P25655 CSM3YMR048W 954 nt2.34□□□□□ -2.03
CDC39P25655 IST1YNL265C 897 nt2.34□□□□□ -2.03
CDC39P25655 YPL014WYPL014W 1146 nt2.34□□□□□ -2.03
CDC39P25655 ISA2YPR067W 558 nt2.34□□□□□ -2.03
CDC39P25655 TGL1YKL140W 1647 nt2.34□□□□□ -2.03
CDC39P25655 ZDS2YML109W 2829 nt2.34□□□□□ -2.04
CDC39P25655 CDC20YGL116W 1833 nt2.33□□□□□ -2.04
CDC39P25655 DLS1YJL065C 504 nt2.33□□□□□ -2.04
CDC39P25655 REH1YLR387C 1299 nt2.33□□□□□ -2.04
CDC39P25655 DAP2YHR028C 2457 nt2.33□□□□□ -2.04
CDC39P25655 YPL150WYPL150W 2706 nt2.33□□□□□ -2.04
CDC39P25655 STP2YHR006W 1626 nt2.33□□□□□ -2.04
CDC39P25655 CHS3YBR023C 3498 nt2.33□□□□□ -2.04
CDC39P25655 YDR132CYDR132C 1488 nt2.33□□□□□ -2.04
CDC39P25655 UTP25YIL091C 2166 nt2.33□□□□□ -2.04
CDC39P25655 PDX1YGR193C 1233 nt2.33□□□□□ -2.04
CDC39P25655 YNR071CYNR071C 1029 nt2.33□□□□□ -2.04
CDC39P25655 YBL108WYBL108W 306 nt2.33□□□□□ -2.04
CDC39P25655 NEW1YPL226W 3591 nt2.33□□□□□ -2.04
CDC39P25655 YPL216WYPL216W 3309 nt2.32□□□□□ -2.04
CDC39P25655 RPS28BYLR264W 204 nt2.32□□□□□ -2.04
CDC39P25655 NDT80YHR124W 1884 nt2.32□□□□□ -2.04
CDC39P25655 TSC11YER093C 4293 nt2.32□□□□□ -2.04
CDC39P25655 YSP2YDR326C 4317 nt2.32□□□□□ -2.04
CDC39P25655 YFL040WYFL040W 1623 nt2.32□□□□□ -2.04
CDC39P25655 RPL24BYGR148C 468 nt2.32□□□□□ -2.04
CDC39P25655 YHL005CYHL005C 393 nt2.32□□□□□ -2.04
CDC39P25655 GRE3YHR104W 984 nt2.32□□□□□ -2.04
CDC39P25655 PSY1YKL076C 384 nt2.32□□□□□ -2.04
CDC39P25655 LCL2YLR104W 396 nt2.32□□□□□ -2.04
CDC39P25655 TVP18YMR071C 504 nt2.32□□□□□ -2.04
CDC39P25655 PEX11YOL147C 711 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms