Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL8A2P25067 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL8A2P25067 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.15■□□□□ 0.5
COL8A2P25067 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.15■□□□□ 0.5
COL8A2P25067 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
COL8A2P25067 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.15■□□□□ 0.5
COL8A2P25067 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL8A2P25067 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COL8A2P25067 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL8A2P25067 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.14■□□□□ 0.5
COL8A2P25067 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL8A2P25067 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.14■□□□□ 0.49
COL8A2P25067 AC090192.1-201ENST00000517740 490 ntBASIC18.14■□□□□ 0.49
COL8A2P25067 AC137761.2-201ENST00000561729 223 ntBASIC18.14■□□□□ 0.49
COL8A2P25067 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.14■□□□□ 0.49
COL8A2P25067 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.14■□□□□ 0.49
COL8A2P25067 AC145350.3-201ENST00000569033 163 ntBASIC18.14■□□□□ 0.49
COL8A2P25067 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL8A2P25067 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL8A2P25067 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL8A2P25067 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.14■□□□□ 0.49
COL8A2P25067 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.14■□□□□ 0.49
COL8A2P25067 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL8A2P25067 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL8A2P25067 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.13■□□□□ 0.49
COL8A2P25067 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL8A2P25067 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.13■□□□□ 0.49
COL8A2P25067 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL8A2P25067 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL8A2P25067 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL8A2P25067 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.13■□□□□ 0.49
COL8A2P25067 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL8A2P25067 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COL8A2P25067 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.13■□□□□ 0.49
COL8A2P25067 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
COL8A2P25067 AC137767.1-201ENST00000602918 1920 ntBASIC18.13■□□□□ 0.49
COL8A2P25067 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
COL8A2P25067 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.13■□□□□ 0.49
COL8A2P25067 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.13■□□□□ 0.49
COL8A2P25067 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL8A2P25067 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL8A2P25067 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL8A2P25067 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL8A2P25067 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.12■□□□□ 0.49
COL8A2P25067 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL8A2P25067 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.12■□□□□ 0.49
COL8A2P25067 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL8A2P25067 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL8A2P25067 AC016769.1-201ENST00000409132 1010 ntBASIC18.12■□□□□ 0.49
COL8A2P25067 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.12■□□□□ 0.49
COL8A2P25067 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL8A2P25067 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COL8A2P25067 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.11■□□□□ 0.49
COL8A2P25067 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.11■□□□□ 0.49
COL8A2P25067 KRT19P1-201ENST00000405746 1186 ntBASIC18.11■□□□□ 0.49
COL8A2P25067 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.11■□□□□ 0.49
COL8A2P25067 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.11■□□□□ 0.49
COL8A2P25067 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.11■□□□□ 0.49
COL8A2P25067 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.11■□□□□ 0.49
COL8A2P25067 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.11■□□□□ 0.49
COL8A2P25067 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL8A2P25067 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COL8A2P25067 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.11■□□□□ 0.49
COL8A2P25067 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.11■□□□□ 0.49
COL8A2P25067 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.1■□□□□ 0.49
COL8A2P25067 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.1■□□□□ 0.49
COL8A2P25067 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.1■□□□□ 0.49
COL8A2P25067 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.1■□□□□ 0.49
COL8A2P25067 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.1■□□□□ 0.49
COL8A2P25067 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.1■□□□□ 0.49
COL8A2P25067 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL8A2P25067 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.1■□□□□ 0.49
COL8A2P25067 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL8A2P25067 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
COL8A2P25067 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 AC055733.4-201ENST00000638462 1354 ntBASIC18.09■□□□□ 0.49
COL8A2P25067 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COL8A2P25067 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.09■□□□□ 0.49
COL8A2P25067 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.09■□□□□ 0.49
COL8A2P25067 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms