Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPH2P23942 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPH2P23942 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPH2P23942 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPH2P23942 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.49■□□□□ 0.87
PRPH2P23942 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
PRPH2P23942 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPH2P23942 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.49■□□□□ 0.87
PRPH2P23942 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.49■□□□□ 0.87
PRPH2P23942 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.48■□□□□ 0.87
PRPH2P23942 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.48■□□□□ 0.87
PRPH2P23942 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PRPH2P23942 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRPH2P23942 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
PRPH2P23942 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRPH2P23942 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRPH2P23942 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRPH2P23942 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.47■□□□□ 0.87
PRPH2P23942 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRPH2P23942 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.47■□□□□ 0.87
PRPH2P23942 AP004607.7-201ENST00000527152 1677 ntBASIC20.47■□□□□ 0.87
PRPH2P23942 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.47■□□□□ 0.87
PRPH2P23942 FEM1AP4-201ENST00000443167 1987 ntBASIC20.46■□□□□ 0.87
PRPH2P23942 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRPH2P23942 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRPH2P23942 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.46■□□□□ 0.87
PRPH2P23942 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.46■□□□□ 0.87
PRPH2P23942 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRPH2P23942 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPH2P23942 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.45■□□□□ 0.86
PRPH2P23942 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRPH2P23942 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 AL136116.3-201ENST00000402907 1138 ntBASIC20.45■□□□□ 0.86
PRPH2P23942 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
PRPH2P23942 BX842568.3-201ENST00000418104 571 ntBASIC20.45■□□□□ 0.86
PRPH2P23942 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPH2P23942 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.45■□□□□ 0.86
PRPH2P23942 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.45■□□□□ 0.86
PRPH2P23942 AC133561.4-201ENST00000566112 224 ntBASIC20.45■□□□□ 0.86
PRPH2P23942 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPH2P23942 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.45■□□□□ 0.86
PRPH2P23942 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.45■□□□□ 0.86
PRPH2P23942 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.45■□□□□ 0.86
PRPH2P23942 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPH2P23942 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPH2P23942 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PRPH2P23942 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.44■□□□□ 0.86
PRPH2P23942 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPH2P23942 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPH2P23942 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPH2P23942 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
PRPH2P23942 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPH2P23942 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPH2P23942 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPH2P23942 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PRPH2P23942 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPH2P23942 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.44■□□□□ 0.86
PRPH2P23942 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.44■□□□□ 0.86
PRPH2P23942 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPH2P23942 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPH2P23942 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPH2P23942 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPH2P23942 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPH2P23942 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.43■□□□□ 0.86
PRPH2P23942 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.43■□□□□ 0.86
PRPH2P23942 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRPH2P23942 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPH2P23942 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPH2P23942 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPH2P23942 AC005229.4-201ENST00000610085 2198 ntBASIC20.43■□□□□ 0.86
PRPH2P23942 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.43■□□□□ 0.86
PRPH2P23942 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPH2P23942 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPH2P23942 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 AC003102.1-202ENST00000563394 1796 ntBASIC20.42■□□□□ 0.86
PRPH2P23942 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PRPH2P23942 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPH2P23942 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPH2P23942 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPH2P23942 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms