Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 AL162430.1-201ENST00000480705 870 ntBASIC20.93■□□□□ 0.94
CDH3P22223 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.93■□□□□ 0.94
CDH3P22223 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.93■□□□□ 0.94
CDH3P22223 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 LINC02228-203ENST00000641970 1355 ntBASIC20.93■□□□□ 0.94
CDH3P22223 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH3P22223 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CDH3P22223 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH3P22223 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDH3P22223 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 SMUG1P1-201ENST00000590640 811 ntBASIC20.92■□□□□ 0.94
CDH3P22223 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.92■□□□□ 0.94
CDH3P22223 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH3P22223 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH3P22223 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH3P22223 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDH3P22223 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CDH3P22223 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH3P22223 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.91■□□□□ 0.94
CDH3P22223 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH3P22223 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 AC104564.3-201ENST00000582367 638 ntBASIC20.91■□□□□ 0.94
CDH3P22223 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH3P22223 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
CDH3P22223 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH3P22223 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH3P22223 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH3P22223 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH3P22223 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CDH3P22223 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH3P22223 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH3P22223 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH3P22223 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.9■□□□□ 0.94
CDH3P22223 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH3P22223 CCDC92B-201ENST00000575506 885 ntBASIC20.9■□□□□ 0.94
CDH3P22223 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH3P22223 AC137767.1-201ENST00000602918 1920 ntBASIC20.9■□□□□ 0.94
CDH3P22223 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH3P22223 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDH3P22223 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.89■□□□□ 0.94
CDH3P22223 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDH3P22223 BX005040.4-201ENST00000637145 1518 ntBASIC20.89■□□□□ 0.94
CDH3P22223 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.89■□□□□ 0.94
CDH3P22223 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDH3P22223 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH3P22223 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH3P22223 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH3P22223 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CDH3P22223 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH3P22223 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH3P22223 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH3P22223 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CDH3P22223 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH3P22223 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDH3P22223 AC007375.3-201ENST00000600936 2314 ntBASIC20.88■□□□□ 0.93
CDH3P22223 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH3P22223 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH3P22223 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CDH3P22223 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDH3P22223 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH3P22223 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH3P22223 KRT18P14-201ENST00000534205 1250 ntBASIC20.88■□□□□ 0.93
CDH3P22223 DUX4L2-201ENST00000561772 1275 ntBASIC20.88■□□□□ 0.93
CDH3P22223 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH3P22223 AC092666.2-201ENST00000613287 246 ntBASIC20.88■□□□□ 0.93
CDH3P22223 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
CDH3P22223 AC233723.2-201ENST00000623798 2106 ntBASIC20.88■□□□□ 0.93
CDH3P22223 DUX4L6-201ENST00000626483 1275 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms