Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 TERF1P2-201ENST00000583350 1212 ntBASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 AC022517.1-201ENST00000592429 346 ntBASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.42■□□□□ 0.7
TMIGD3P0DMS9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMIGD3P0DMS9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NTF6G-201ENST00000591094 616 ntBASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMIGD3P0DMS9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TMIGD3P0DMS9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.39■□□□□ 0.7
TMIGD3P0DMS9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TMIGD3P0DMS9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
TMIGD3P0DMS9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 AL137784.2-201ENST00000607332 1000 ntBASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 AL137060.1-201ENST00000618151 2648 ntBASIC19.38■□□□□ 0.69
TMIGD3P0DMS9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMIGD3P0DMS9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms