Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 KRT16P3-201ENST00000439127 1283 ntBASIC20.66■□□□□ 0.9
LINGO3P0C6S8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINGO3P0C6S8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINGO3P0C6S8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.64■□□□□ 0.9
LINGO3P0C6S8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LINGO3P0C6S8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINGO3P0C6S8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 AC005703.6-201ENST00000623265 1329 ntBASIC20.64■□□□□ 0.89
LINGO3P0C6S8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINGO3P0C6S8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MIR6724-1-201ENST00000616420 92 ntBASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MIR6724-2-201ENST00000616483 92 ntBASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MIR6724-4-201ENST00000617390 92 ntBASIC20.63■□□□□ 0.89
LINGO3P0C6S8 MIR6724-3-201ENST00000622482 92 ntBASIC20.63■□□□□ 0.89
LINGO3P0C6S8 LINC01006-201ENST00000333319 2292 ntBASIC20.63■□□□□ 0.89
LINGO3P0C6S8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINGO3P0C6S8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 AL356441.2-201ENST00000443009 864 ntBASIC20.62■□□□□ 0.89
LINGO3P0C6S8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.62■□□□□ 0.89
LINGO3P0C6S8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINGO3P0C6S8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms