Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ERCC1P07992 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ERCC1P07992 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC1P07992 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC1P07992 DUX4L4-201ENST00000566884 1269 ntBASIC18.96■□□□□ 0.63
ERCC1P07992 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC1P07992 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC1P07992 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC1P07992 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC1P07992 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.96■□□□□ 0.63
ERCC1P07992 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
ERCC1P07992 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC1P07992 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC1P07992 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ERCC1P07992 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC1P07992 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.95■□□□□ 0.62
ERCC1P07992 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ERCC1P07992 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC1P07992 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.95■□□□□ 0.62
ERCC1P07992 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC1P07992 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ERCC1P07992 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC1P07992 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC1P07992 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ERCC1P07992 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC1P07992 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC1P07992 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC1P07992 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC1P07992 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC1P07992 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC1P07992 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC1P07992 AC133637.1-201ENST00000624115 1537 ntBASIC18.94■□□□□ 0.62
ERCC1P07992 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
ERCC1P07992 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC1P07992 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.93■□□□□ 0.62
ERCC1P07992 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
ERCC1P07992 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 FBXW4P1-201ENST00000426721 2239 ntBASIC18.93■□□□□ 0.62
ERCC1P07992 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC1P07992 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.92■□□□□ 0.62
ERCC1P07992 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.92■□□□□ 0.62
ERCC1P07992 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.92■□□□□ 0.62
ERCC1P07992 IRS3P-201ENST00000223076 1006 ntBASIC18.92■□□□□ 0.62
ERCC1P07992 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ERCC1P07992 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ERCC1P07992 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC1P07992 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC1P07992 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 AL137060.1-201ENST00000618151 2648 ntBASIC18.91■□□□□ 0.62
ERCC1P07992 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC1P07992 RARRES2P6-201ENST00000567333 442 ntBASIC18.91■□□□□ 0.62
ERCC1P07992 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC1P07992 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.91■□□□□ 0.62
ERCC1P07992 AL499627.2-201ENST00000606283 725 ntBASIC18.91■□□□□ 0.62
ERCC1P07992 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ERCC1P07992 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ERCC1P07992 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms