Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.07
RETP07949 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.7■■□□□ 1.07
RETP07949 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RETP07949 AF201337.1-201ENST00000520239 748 ntBASIC21.7■■□□□ 1.06
RETP07949 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.7■■□□□ 1.06
RETP07949 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RETP07949 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RETP07949 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETP07949 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETP07949 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETP07949 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
RETP07949 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.69■■□□□ 1.06
RETP07949 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
RETP07949 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETP07949 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETP07949 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETP07949 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETP07949 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RETP07949 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.68■■□□□ 1.06
RETP07949 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RETP07949 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
RETP07949 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.68■■□□□ 1.06
RETP07949 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETP07949 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETP07949 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.67■■□□□ 1.06
RETP07949 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RETP07949 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RETP07949 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETP07949 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.67■■□□□ 1.06
RETP07949 AC010141.3-201ENST00000456659 717 ntBASIC21.67■■□□□ 1.06
RETP07949 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RETP07949 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RETP07949 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
RETP07949 AC104187.1-201ENST00000607510 612 ntBASIC21.67■■□□□ 1.06
RETP07949 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RETP07949 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RETP07949 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RETP07949 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.66■■□□□ 1.06
RETP07949 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETP07949 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RETP07949 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETP07949 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETP07949 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.66■■□□□ 1.06
RETP07949 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RETP07949 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETP07949 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.66■■□□□ 1.06
RETP07949 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.66■■□□□ 1.06
RETP07949 AC133552.2-202ENST00000575694 574 ntBASIC21.66■■□□□ 1.06
RETP07949 UBE2DNL-204ENST00000602536 740 ntBASIC21.66■■□□□ 1.06
RETP07949 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETP07949 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETP07949 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETP07949 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETP07949 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RETP07949 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETP07949 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETP07949 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETP07949 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.65■■□□□ 1.06
RETP07949 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.65■■□□□ 1.06
RETP07949 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETP07949 AC105036.2-201ENST00000569468 176 ntBASIC21.65■■□□□ 1.06
RETP07949 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RETP07949 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.65■■□□□ 1.06
RETP07949 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.65■■□□□ 1.06
RETP07949 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.64■■□□□ 1.06
RETP07949 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RETP07949 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RETP07949 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RETP07949 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RETP07949 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RETP07949 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RETP07949 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RETP07949 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RETP07949 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RETP07949 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 PRORSD1P-201ENST00000295112 541 ntBASIC21.64■■□□□ 1.05
RETP07949 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RETP07949 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.64■■□□□ 1.05
RETP07949 AP006294.2-201ENST00000641667 209 ntBASIC21.64■■□□□ 1.05
RETP07949 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.64■■□□□ 1.05
RETP07949 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 KRT87P-202ENST00000534226 1464 ntBASIC21.64■■□□□ 1.05
RETP07949 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETP07949 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.63■■□□□ 1.05
RETP07949 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
RETP07949 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.63■■□□□ 1.05
RETP07949 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms