Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-ND3P03897 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND3P03897 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.79■■□□□ 1.08
MT-ND3P03897 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND3P03897 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-ND3P03897 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-ND3P03897 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 UNC93B3-201ENST00000308076 687 ntBASIC21.78■■□□□ 1.08
MT-ND3P03897 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MT-ND3P03897 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-ND3P03897 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-ND3P03897 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
MT-ND3P03897 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND3P03897 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.77■■□□□ 1.08
MT-ND3P03897 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
MT-ND3P03897 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.77■■□□□ 1.08
MT-ND3P03897 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 AC092171.4-201ENST00000609130 632 ntBASIC21.77■■□□□ 1.08
MT-ND3P03897 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.77■■□□□ 1.08
MT-ND3P03897 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND3P03897 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MT-ND3P03897 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
MT-ND3P03897 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-ND3P03897 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-ND3P03897 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 AL136162.1-201ENST00000607711 1078 ntBASIC21.76■■□□□ 1.07
MT-ND3P03897 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.76■■□□□ 1.07
MT-ND3P03897 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND3P03897 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-ND3P03897 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND3P03897 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
MT-ND3P03897 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MT-ND3P03897 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND3P03897 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-ND3P03897 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
MT-ND3P03897 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MT-ND3P03897 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND3P03897 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND3P03897 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND3P03897 AC135279.3-201ENST00000610945 1311 ntBASIC21.75■■□□□ 1.07
MT-ND3P03897 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND3P03897 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND3P03897 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
MT-ND3P03897 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND3P03897 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND3P03897 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-ND3P03897 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MT-ND3P03897 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MT-ND3P03897 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND3P03897 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-ND3P03897 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND3P03897 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
MT-ND3P03897 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.74■■□□□ 1.07
MT-ND3P03897 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
MT-ND3P03897 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MT-ND3P03897 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.73■■□□□ 1.07
MT-ND3P03897 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 AC142381.2-201ENST00000566120 298 ntBASIC21.73■■□□□ 1.07
MT-ND3P03897 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.73■■□□□ 1.07
MT-ND3P03897 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.73■■□□□ 1.07
MT-ND3P03897 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-ND3P03897 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-ND3P03897 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND3P03897 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.73■■□□□ 1.07
MT-ND3P03897 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MT-ND3P03897 AC009102.2-201ENST00000606772 1639 ntBASIC21.73■■□□□ 1.07
MT-ND3P03897 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms