Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 OXCT2P1-201ENST00000447263 1535 ntBASIC20.77■□□□□ 0.92
KRT6AP02538 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
KRT6AP02538 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KRT6AP02538 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT6AP02538 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT6AP02538 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
KRT6AP02538 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT6AP02538 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT6AP02538 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT6AP02538 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT6AP02538 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT6AP02538 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT6AP02538 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT6AP02538 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT6AP02538 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.75■□□□□ 0.91
KRT6AP02538 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT6AP02538 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT6AP02538 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT6AP02538 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KRT6AP02538 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
KRT6AP02538 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT6AP02538 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT6AP02538 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT6AP02538 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT6AP02538 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRT6AP02538 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT6AP02538 AP005435.1-201ENST00000529293 1178 ntBASIC20.74■□□□□ 0.91
KRT6AP02538 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT6AP02538 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT6AP02538 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT6AP02538 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT6AP02538 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KRT6AP02538 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT6AP02538 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT6AP02538 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KRT6AP02538 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT6AP02538 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT6AP02538 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT6AP02538 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT6AP02538 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT6AP02538 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT6AP02538 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT6AP02538 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT6AP02538 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
KRT6AP02538 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 SLC47A1P1-202ENST00000449666 945 ntBASIC20.72■□□□□ 0.91
KRT6AP02538 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.72■□□□□ 0.91
KRT6AP02538 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT6AP02538 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT6AP02538 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT6AP02538 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT6AP02538 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT6AP02538 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT6AP02538 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT6AP02538 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT6AP02538 AC026310.3-201ENST00000625186 2373 ntBASIC20.71■□□□□ 0.91
KRT6AP02538 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6AP02538 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 AL136116.3-201ENST00000402907 1138 ntBASIC20.71■□□□□ 0.91
KRT6AP02538 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 AL034346.1-201ENST00000568244 1277 ntBASIC20.71■□□□□ 0.91
KRT6AP02538 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
KRT6AP02538 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6AP02538 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT6AP02538 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
KRT6AP02538 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms