Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MIR4281-201ENST00000580852 62 ntBASIC18.57■□□□□ 0.56
HLA-DQB1P01920 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB1P01920 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 OXCT2P1-201ENST00000447263 1535 ntBASIC18.56■□□□□ 0.56
HLA-DQB1P01920 KRT18P24-201ENST00000344739 1156 ntBASIC18.56■□□□□ 0.56
HLA-DQB1P01920 ABHD17AP5-201ENST00000580133 923 ntBASIC18.56■□□□□ 0.56
HLA-DQB1P01920 NTF6A-201ENST00000591175 560 ntBASIC18.56■□□□□ 0.56
HLA-DQB1P01920 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HLA-DQB1P01920 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 THA1P-201ENST00000590384 1145 ntBASIC18.55■□□□□ 0.56
HLA-DQB1P01920 AC074183.2-201ENST00000623112 922 ntBASIC18.55■□□□□ 0.56
HLA-DQB1P01920 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DQB1P01920 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HLA-DQB1P01920 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 BHLHE23-202ENST00000612929 1109 ntBASIC18.53■□□□□ 0.56
HLA-DQB1P01920 AC009086.3-201ENST00000623486 1008 ntBASIC18.53■□□□□ 0.56
HLA-DQB1P01920 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 AP005212.1-201ENST00000581547 1997 ntBASIC18.53■□□□□ 0.56
HLA-DQB1P01920 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB1P01920 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB1P01920 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB1P01920 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB1P01920 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB1P01920 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
HLA-DQB1P01920 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 AL020996.1-203ENST00000536896 2307 ntBASIC18.51■□□□□ 0.55
HLA-DQB1P01920 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB1P01920 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms