Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQA2P01906 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 FAM99A-202ENST00000538190 1989 ntBASIC19.21■□□□□ 0.67
HLA-DQA2P01906 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 AIRN-201ENST00000601203 4374 ntBASIC19.21■□□□□ 0.67
HLA-DQA2P01906 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQA2P01906 AL137060.1-201ENST00000618151 2648 ntBASIC19.21■□□□□ 0.66
HLA-DQA2P01906 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 AL031602.1-201ENST00000633169 911 ntBASIC19.2■□□□□ 0.66
HLA-DQA2P01906 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA2P01906 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 AC079089.2-201ENST00000531211 1277 ntBASIC19.19■□□□□ 0.66
HLA-DQA2P01906 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 AC087239.1-201ENST00000622671 572 ntBASIC19.19■□□□□ 0.66
HLA-DQA2P01906 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA2P01906 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 AC138932.1-201ENST00000534164 6830 ntBASIC19.18■□□□□ 0.66
HLA-DQA2P01906 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 AL512631.2-201ENST00000604634 923 ntBASIC19.18■□□□□ 0.66
HLA-DQA2P01906 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DQA2P01906 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 OR7E47P-201ENST00000546390 1422 ntBASIC19.17■□□□□ 0.66
HLA-DQA2P01906 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 AC068587.7-201ENST00000641602 218 ntBASIC19.17■□□□□ 0.66
HLA-DQA2P01906 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA2P01906 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms