Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.37■■□□□ 1.49
TDP2O95551 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.37■■□□□ 1.49
TDP2O95551 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TDP2O95551 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TDP2O95551 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.37■■□□□ 1.49
TDP2O95551 CCDC92B-201ENST00000575506 885 ntBASIC24.37■■□□□ 1.49
TDP2O95551 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.37■■□□□ 1.49
TDP2O95551 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TDP2O95551 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TDP2O95551 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.36■■□□□ 1.49
TDP2O95551 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TDP2O95551 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TDP2O95551 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TDP2O95551 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
TDP2O95551 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.36■■□□□ 1.49
TDP2O95551 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.36■■□□□ 1.49
TDP2O95551 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
TDP2O95551 LINC02228-203ENST00000641970 1355 ntBASIC24.36■■□□□ 1.49
TDP2O95551 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TDP2O95551 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.36■■□□□ 1.49
TDP2O95551 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
TDP2O95551 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TDP2O95551 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.35■■□□□ 1.49
TDP2O95551 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TDP2O95551 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TDP2O95551 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
TDP2O95551 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TDP2O95551 FAM99A-202ENST00000538190 1989 ntBASIC24.35■■□□□ 1.49
TDP2O95551 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TDP2O95551 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TDP2O95551 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.35■■□□□ 1.49
TDP2O95551 AL034346.1-201ENST00000568244 1277 ntBASIC24.35■■□□□ 1.49
TDP2O95551 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.35■■□□□ 1.49
TDP2O95551 TERF1P2-201ENST00000583350 1212 ntBASIC24.35■■□□□ 1.49
TDP2O95551 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TDP2O95551 AC009237.3-201ENST00000393279 1427 ntBASIC24.35■■□□□ 1.49
TDP2O95551 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.35■■□□□ 1.49
TDP2O95551 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.34■■□□□ 1.49
TDP2O95551 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TDP2O95551 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TDP2O95551 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TDP2O95551 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.34■■□□□ 1.49
TDP2O95551 AP006587.3-201ENST00000525742 1516 ntBASIC24.34■■□□□ 1.49
TDP2O95551 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TDP2O95551 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.33■■□□□ 1.49
TDP2O95551 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TDP2O95551 AC055733.4-201ENST00000638462 1354 ntBASIC24.33■■□□□ 1.49
TDP2O95551 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TDP2O95551 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TDP2O95551 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L2-201ENST00000561772 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L6-201ENST00000626483 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L1-201ENST00000627662 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L8-201ENST00000629013 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L3-201ENST00000630187 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L7-201ENST00000630678 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 DUX4L5-201ENST00000630834 1275 ntBASIC24.33■■□□□ 1.49
TDP2O95551 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TDP2O95551 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TDP2O95551 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TDP2O95551 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TDP2O95551 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.33■■□□□ 1.48
TDP2O95551 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
TDP2O95551 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.32■■□□□ 1.48
TDP2O95551 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.32■■□□□ 1.48
TDP2O95551 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.32■■□□□ 1.48
TDP2O95551 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.32■■□□□ 1.48
TDP2O95551 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.32■■□□□ 1.48
TDP2O95551 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TDP2O95551 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
TDP2O95551 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TDP2O95551 KRT18P14-201ENST00000534205 1250 ntBASIC24.31■■□□□ 1.48
TDP2O95551 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.31■■□□□ 1.48
TDP2O95551 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TDP2O95551 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TDP2O95551 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.31■■□□□ 1.48
TDP2O95551 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TDP2O95551 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TDP2O95551 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms