Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNX4O95219 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNX4O95219 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.08■□□□□ 0.8
SNX4O95219 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNX4O95219 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
SNX4O95219 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 TSPY26P-201ENST00000476365 1326 ntBASIC20.07■□□□□ 0.8
SNX4O95219 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SNX4O95219 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.07■□□□□ 0.8
SNX4O95219 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SNX4O95219 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SNX4O95219 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX4O95219 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX4O95219 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX4O95219 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX4O95219 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX4O95219 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX4O95219 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNX4O95219 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX4O95219 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX4O95219 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX4O95219 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SNX4O95219 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX4O95219 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.05■□□□□ 0.8
SNX4O95219 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX4O95219 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX4O95219 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.05■□□□□ 0.8
SNX4O95219 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX4O95219 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX4O95219 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX4O95219 AC087239.1-201ENST00000622671 572 ntBASIC20.05■□□□□ 0.8
SNX4O95219 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX4O95219 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX4O95219 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX4O95219 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX4O95219 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SNX4O95219 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SNX4O95219 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
SNX4O95219 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SNX4O95219 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX4O95219 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX4O95219 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SNX4O95219 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX4O95219 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
SNX4O95219 AL031602.1-201ENST00000633169 911 ntBASIC20.03■□□□□ 0.8
SNX4O95219 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX4O95219 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX4O95219 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 MIR935-201ENST00000401179 91 ntBASIC20.02■□□□□ 0.8
SNX4O95219 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX4O95219 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX4O95219 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SNX4O95219 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
SNX4O95219 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.79
SNX4O95219 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNX4O95219 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNX4O95219 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX4O95219 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SNX4O95219 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SNX4O95219 MIR572-201ENST00000384983 95 ntBASIC20.01■□□□□ 0.79
SNX4O95219 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX4O95219 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms