Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC026310.3-201ENST00000625186 2373 ntBASIC21.69■■□□□ 1.06
USP1O94782 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP1O94782 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP1O94782 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP1O94782 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.68■■□□□ 1.06
USP1O94782 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP1O94782 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.68■■□□□ 1.06
USP1O94782 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
USP1O94782 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.68■■□□□ 1.06
USP1O94782 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP1O94782 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP1O94782 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP1O94782 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.68■■□□□ 1.06
USP1O94782 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP1O94782 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP1O94782 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP1O94782 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP1O94782 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.67■■□□□ 1.06
USP1O94782 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
USP1O94782 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP1O94782 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.67■■□□□ 1.06
USP1O94782 AC011298.3-201ENST00000615796 283 ntBASIC21.67■■□□□ 1.06
USP1O94782 AC136469.2-201ENST00000623944 1028 ntBASIC21.67■■□□□ 1.06
USP1O94782 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.67■■□□□ 1.06
USP1O94782 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.67■■□□□ 1.06
USP1O94782 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP1O94782 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP1O94782 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
USP1O94782 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.66■■□□□ 1.06
USP1O94782 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP1O94782 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
USP1O94782 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.66■■□□□ 1.06
USP1O94782 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.66■■□□□ 1.06
USP1O94782 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.66■■□□□ 1.06
USP1O94782 OXCT2P1-201ENST00000447263 1535 ntBASIC21.65■■□□□ 1.06
USP1O94782 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.65■■□□□ 1.06
USP1O94782 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
USP1O94782 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.65■■□□□ 1.06
USP1O94782 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.65■■□□□ 1.06
USP1O94782 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.65■■□□□ 1.06
USP1O94782 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.65■■□□□ 1.06
USP1O94782 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.65■■□□□ 1.06
USP1O94782 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP1O94782 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
USP1O94782 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP1O94782 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.64■■□□□ 1.06
USP1O94782 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.64■■□□□ 1.06
USP1O94782 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP1O94782 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
USP1O94782 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
USP1O94782 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP1O94782 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP1O94782 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
USP1O94782 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP1O94782 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.63■■□□□ 1.05
USP1O94782 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.63■■□□□ 1.05
USP1O94782 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP1O94782 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP1O94782 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.63■■□□□ 1.05
USP1O94782 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.63■■□□□ 1.05
USP1O94782 AL136116.3-201ENST00000402907 1138 ntBASIC21.63■■□□□ 1.05
USP1O94782 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.63■■□□□ 1.05
USP1O94782 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP1O94782 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.63■■□□□ 1.05
USP1O94782 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.63■■□□□ 1.05
USP1O94782 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.62■■□□□ 1.05
USP1O94782 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP1O94782 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP1O94782 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
USP1O94782 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
USP1O94782 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
USP1O94782 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
USP1O94782 AP005435.1-201ENST00000529293 1178 ntBASIC21.62■■□□□ 1.05
USP1O94782 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
USP1O94782 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP1O94782 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
USP1O94782 AC026471.6-201ENST00000622954 1905 ntBASIC21.62■■□□□ 1.05
USP1O94782 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP1O94782 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP1O94782 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
USP1O94782 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP1O94782 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
USP1O94782 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
USP1O94782 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms