Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLN5O75503 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
CLN5O75503 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLN5O75503 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLN5O75503 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
CLN5O75503 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLN5O75503 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLN5O75503 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLN5O75503 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLN5O75503 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.38■□□□□ 0.37
CLN5O75503 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CLN5O75503 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.38■□□□□ 0.37
CLN5O75503 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLN5O75503 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLN5O75503 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLN5O75503 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLN5O75503 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLN5O75503 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLN5O75503 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
CLN5O75503 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.37■□□□□ 0.37
CLN5O75503 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.37■□□□□ 0.37
CLN5O75503 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.37■□□□□ 0.37
CLN5O75503 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.37■□□□□ 0.37
CLN5O75503 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.37■□□□□ 0.37
CLN5O75503 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLN5O75503 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLN5O75503 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLN5O75503 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLN5O75503 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.36■□□□□ 0.37
CLN5O75503 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLN5O75503 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.36■□□□□ 0.37
CLN5O75503 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.36■□□□□ 0.37
CLN5O75503 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 FBXW4P1-201ENST00000426721 2239 ntBASIC17.36■□□□□ 0.37
CLN5O75503 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLN5O75503 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLN5O75503 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 AC139530.1-201ENST00000575312 1977 ntBASIC17.35■□□□□ 0.37
CLN5O75503 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CLN5O75503 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLN5O75503 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.35■□□□□ 0.37
CLN5O75503 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLN5O75503 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.35■□□□□ 0.37
CLN5O75503 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLN5O75503 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.35■□□□□ 0.37
CLN5O75503 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLN5O75503 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.35■□□□□ 0.37
CLN5O75503 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.35■□□□□ 0.37
CLN5O75503 AC026310.3-201ENST00000625186 2373 ntBASIC17.35■□□□□ 0.37
CLN5O75503 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLN5O75503 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLN5O75503 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.34■□□□□ 0.37
CLN5O75503 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLN5O75503 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLN5O75503 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.34■□□□□ 0.37
CLN5O75503 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms