Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DUX4L3-201ENST00000630187 1275 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4L7-201ENST00000630678 1275 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4L5-201ENST00000630834 1275 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT3O75175 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT3O75175 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT3O75175 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT3O75175 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT3O75175 AC007375.3-201ENST00000600936 2314 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.69■□□□□ 0.9
CNOT3O75175 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT3O75175 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.69■□□□□ 0.9
CNOT3O75175 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.69■□□□□ 0.9
CNOT3O75175 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT3O75175 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT3O75175 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CNOT3O75175 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT3O75175 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT3O75175 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CNOT3O75175 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT3O75175 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT3O75175 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CNOT3O75175 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNOT3O75175 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CNOT3O75175 AC123595.1-201ENST00000440769 1046 ntBASIC20.68■□□□□ 0.9
CNOT3O75175 AC034268.1-201ENST00000441047 882 ntBASIC20.68■□□□□ 0.9
CNOT3O75175 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT3O75175 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT3O75175 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT3O75175 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT3O75175 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT3O75175 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT3O75175 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CNOT3O75175 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT3O75175 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT3O75175 GUSBP5-202ENST00000510805 1989 ntBASIC20.67■□□□□ 0.9
CNOT3O75175 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CNOT3O75175 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.67■□□□□ 0.9
CNOT3O75175 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.67■□□□□ 0.9
CNOT3O75175 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNOT3O75175 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT3O75175 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT3O75175 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT3O75175 DUSP8P3-201ENST00000399571 1760 ntBASIC20.67■□□□□ 0.9
CNOT3O75175 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT3O75175 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT3O75175 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CNOT3O75175 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
CNOT3O75175 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.66■□□□□ 0.9
CNOT3O75175 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT3O75175 AC105233.4-201ENST00000642045 216 ntBASIC20.66■□□□□ 0.9
CNOT3O75175 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.66■□□□□ 0.9
CNOT3O75175 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT3O75175 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.66■□□□□ 0.9
CNOT3O75175 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.66■□□□□ 0.9
CNOT3O75175 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.66■□□□□ 0.9
CNOT3O75175 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT3O75175 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNOT3O75175 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT3O75175 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT3O75175 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CNOT3O75175 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.65■□□□□ 0.9
CNOT3O75175 CCDC92B-201ENST00000575506 885 ntBASIC20.65■□□□□ 0.9
CNOT3O75175 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT3O75175 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNOT3O75175 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT3O75175 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CNOT3O75175 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT3O75175 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT3O75175 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNOT3O75175 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT3O75175 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT3O75175 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT3O75175 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.64■□□□□ 0.89
CNOT3O75175 KRT18P5-201ENST00000436075 1291 ntBASIC20.64■□□□□ 0.89
CNOT3O75175 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT3O75175 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms