Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 AL034346.1-201ENST00000568244 1277 ntBASIC19.16■□□□□ 0.66
TRAF3IP2O43734 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP2O43734 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 MIR572-201ENST00000384983 95 ntBASIC19.15■□□□□ 0.66
TRAF3IP2O43734 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP2O43734 AP004607.7-201ENST00000527152 1677 ntBASIC19.14■□□□□ 0.66
TRAF3IP2O43734 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 AC105233.4-201ENST00000642045 216 ntBASIC19.14■□□□□ 0.65
TRAF3IP2O43734 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP2O43734 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAF3IP2O43734 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 AC010542.4-201ENST00000563151 1910 ntBASIC19.12■□□□□ 0.65
TRAF3IP2O43734 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRAF3IP2O43734 AC026471.6-201ENST00000622954 1905 ntBASIC19.12■□□□□ 0.65
TRAF3IP2O43734 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 AC105265.2-201ENST00000467189 838 ntBASIC19.11■□□□□ 0.65
TRAF3IP2O43734 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP2O43734 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms