Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK2O43353 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.82■■□□□ 1.08
RIPK2O43353 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK2O43353 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK2O43353 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK2O43353 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK2O43353 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.82■■□□□ 1.08
RIPK2O43353 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.82■■□□□ 1.08
RIPK2O43353 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RIPK2O43353 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RIPK2O43353 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.81■■□□□ 1.08
RIPK2O43353 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.81■■□□□ 1.08
RIPK2O43353 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.81■■□□□ 1.08
RIPK2O43353 LINC01006-201ENST00000333319 2292 ntBASIC21.81■■□□□ 1.08
RIPK2O43353 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK2O43353 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK2O43353 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.8■■□□□ 1.08
RIPK2O43353 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RIPK2O43353 AC092667.1-201ENST00000434301 2586 ntBASIC21.8■■□□□ 1.08
RIPK2O43353 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK2O43353 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.8■■□□□ 1.08
RIPK2O43353 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RIPK2O43353 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.8■■□□□ 1.08
RIPK2O43353 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.8■■□□□ 1.08
RIPK2O43353 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK2O43353 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK2O43353 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.8■■□□□ 1.08
RIPK2O43353 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 AL121603.2-201ENST00000557373 2117 ntBASIC21.79■■□□□ 1.08
RIPK2O43353 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RIPK2O43353 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.79■■□□□ 1.08
RIPK2O43353 BX664725.1-201ENST00000438252 379 ntBASIC21.79■■□□□ 1.08
RIPK2O43353 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK2O43353 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK2O43353 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.79■■□□□ 1.08
RIPK2O43353 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.79■■□□□ 1.08
RIPK2O43353 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK2O43353 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK2O43353 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK2O43353 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK2O43353 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK2O43353 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RIPK2O43353 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK2O43353 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK2O43353 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK2O43353 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RIPK2O43353 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK2O43353 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.77■■□□□ 1.08
RIPK2O43353 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.77■■□□□ 1.08
RIPK2O43353 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK2O43353 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK2O43353 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RIPK2O43353 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK2O43353 OR7E47P-201ENST00000546390 1422 ntBASIC21.77■■□□□ 1.08
RIPK2O43353 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIPK2O43353 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RIPK2O43353 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RIPK2O43353 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RIPK2O43353 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
RIPK2O43353 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RIPK2O43353 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK2O43353 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK2O43353 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.76■■□□□ 1.07
RIPK2O43353 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RIPK2O43353 AL033527.3-201ENST00000566366 1196 ntBASIC21.76■■□□□ 1.07
RIPK2O43353 AC092028.1-203ENST00000608262 953 ntBASIC21.76■■□□□ 1.07
RIPK2O43353 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIPK2O43353 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.76■■□□□ 1.07
RIPK2O43353 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 OXCT2P1-201ENST00000447263 1535 ntBASIC21.75■■□□□ 1.07
RIPK2O43353 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.75■■□□□ 1.07
RIPK2O43353 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.75■■□□□ 1.07
RIPK2O43353 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.75■■□□□ 1.07
RIPK2O43353 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RIPK2O43353 AC012354.3-201ENST00000623734 483 ntBASIC21.75■■□□□ 1.07
RIPK2O43353 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
RIPK2O43353 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK2O43353 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms