Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TO15178 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.81■□□□□ 0.76
TO15178 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.81■□□□□ 0.76
TO15178 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TO15178 YBX1P1-201ENST00000445822 960 ntBASIC19.8■□□□□ 0.76
TO15178 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TO15178 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.8■□□□□ 0.76
TO15178 AC005224.4-201ENST00000583262 1652 ntBASIC19.8■□□□□ 0.76
TO15178 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TO15178 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TO15178 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TO15178 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TO15178 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.79■□□□□ 0.76
TO15178 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.79■□□□□ 0.76
TO15178 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TO15178 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TO15178 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TO15178 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
TO15178 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TO15178 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TO15178 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TO15178 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.78■□□□□ 0.76
TO15178 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TO15178 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TO15178 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
TO15178 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TO15178 AP006587.3-201ENST00000525742 1516 ntBASIC19.77■□□□□ 0.76
TO15178 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.77■□□□□ 0.76
TO15178 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.77■□□□□ 0.76
TO15178 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TO15178 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TO15178 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.77■□□□□ 0.76
TO15178 AC055733.4-201ENST00000638462 1354 ntBASIC19.77■□□□□ 0.76
TO15178 LINC02228-203ENST00000641970 1355 ntBASIC19.77■□□□□ 0.76
TO15178 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TO15178 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TO15178 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TO15178 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.76■□□□□ 0.75
TO15178 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TO15178 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TO15178 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TO15178 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TO15178 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TO15178 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.76■□□□□ 0.75
TO15178 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TO15178 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
TO15178 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.76■□□□□ 0.75
TO15178 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.76■□□□□ 0.75
TO15178 C11orf96-202ENST00000528572 1834 ntBASIC19.76■□□□□ 0.75
TO15178 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TO15178 FAM99A-202ENST00000538190 1989 ntBASIC19.75■□□□□ 0.75
TO15178 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TO15178 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
TO15178 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
TO15178 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TO15178 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
TO15178 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TO15178 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.75■□□□□ 0.75
TO15178 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.75■□□□□ 0.75
TO15178 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TO15178 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TO15178 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.75■□□□□ 0.75
TO15178 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TO15178 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.75■□□□□ 0.75
TO15178 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TO15178 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TO15178 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TO15178 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.74■□□□□ 0.75
TO15178 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 AC097381.1-201ENST00000429019 1296 ntBASIC19.74■□□□□ 0.75
TO15178 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.74■□□□□ 0.75
TO15178 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.74■□□□□ 0.75
TO15178 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
TO15178 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TO15178 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TO15178 EP400NL-214ENST00000641289 2402 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms