Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH17O14917 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH17O14917 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH17O14917 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH17O14917 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH17O14917 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PCDH17O14917 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PCDH17O14917 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDH17O14917 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH17O14917 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH17O14917 LINC02228-203ENST00000641970 1355 ntBASIC20.46■□□□□ 0.87
PCDH17O14917 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH17O14917 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH17O14917 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH17O14917 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH17O14917 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH17O14917 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH17O14917 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH17O14917 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH17O14917 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH17O14917 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH17O14917 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
PCDH17O14917 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCDH17O14917 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH17O14917 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH17O14917 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.45■□□□□ 0.86
PCDH17O14917 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDH17O14917 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH17O14917 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDH17O14917 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH17O14917 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDH17O14917 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH17O14917 AC080038.3-201ENST00000623346 1952 ntBASIC20.45■□□□□ 0.86
PCDH17O14917 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDH17O14917 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDH17O14917 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 OXCT2P1-201ENST00000447263 1535 ntBASIC20.44■□□□□ 0.86
PCDH17O14917 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDH17O14917 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH17O14917 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH17O14917 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH17O14917 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH17O14917 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDH17O14917 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH17O14917 AC092053.2-201ENST00000640557 1818 ntBASIC20.43■□□□□ 0.86
PCDH17O14917 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PCDH17O14917 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH17O14917 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH17O14917 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDH17O14917 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PCDH17O14917 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH17O14917 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH17O14917 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH17O14917 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH17O14917 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCDH17O14917 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH17O14917 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PCDH17O14917 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCDH17O14917 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH17O14917 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH17O14917 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PCDH17O14917 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDH17O14917 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH17O14917 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH17O14917 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH17O14917 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDH17O14917 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH17O14917 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH17O14917 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH17O14917 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH17O14917 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH17O14917 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDH17O14917 C11orf96-202ENST00000528572 1834 ntBASIC20.41■□□□□ 0.86
PCDH17O14917 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH17O14917 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH17O14917 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms