Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC37.39■■■■□ 3.58
CUX2O14529 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
CUX2O14529 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC37.39■■■■□ 3.58
CUX2O14529 AC087499.1-201ENST00000418141 1075 ntBASIC37.39■■■■□ 3.58
CUX2O14529 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC37.39■■■■□ 3.58
CUX2O14529 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC37.39■■■■□ 3.58
CUX2O14529 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC37.39■■■■□ 3.58
CUX2O14529 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
CUX2O14529 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC37.39■■■■□ 3.58
CUX2O14529 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC37.39■■■■□ 3.58
CUX2O14529 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC37.38■■■■□ 3.58
CUX2O14529 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CUX2O14529 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CUX2O14529 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CUX2O14529 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC37.38■■■■□ 3.57
CUX2O14529 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC37.38■■■■□ 3.57
CUX2O14529 SERP1-208ENST00000491660 830 ntTSL 2 BASIC37.38■■■■□ 3.57
CUX2O14529 BRWD1-AS2-201ENST00000603064 1028 ntBASIC37.38■■■■□ 3.57
CUX2O14529 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC37.37■■■■□ 3.57
CUX2O14529 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CUX2O14529 BMP1-204ENST00000397814 836 ntTSL 4 BASIC37.37■■■■□ 3.57
CUX2O14529 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC37.37■■■■□ 3.57
CUX2O14529 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC37.37■■■■□ 3.57
CUX2O14529 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC37.36■■■■□ 3.57
CUX2O14529 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CUX2O14529 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CUX2O14529 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
CUX2O14529 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
CUX2O14529 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC37.36■■■■□ 3.57
CUX2O14529 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC37.36■■■■□ 3.57
CUX2O14529 C1QBPP2-201ENST00000528754 825 ntBASIC37.36■■■■□ 3.57
CUX2O14529 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC37.36■■■■□ 3.57
CUX2O14529 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC37.36■■■■□ 3.57
CUX2O14529 MFF-207ENST00000409565 1548 ntTSL 2 BASIC37.36■■■■□ 3.57
CUX2O14529 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC37.35■■■■□ 3.57
CUX2O14529 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC37.35■■■■□ 3.57
CUX2O14529 TMPOP1-202ENST00000424642 1267 ntBASIC37.35■■■■□ 3.57
CUX2O14529 AC012618.2-201ENST00000428058 849 ntBASIC37.35■■■■□ 3.57
CUX2O14529 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC37.35■■■■□ 3.57
CUX2O14529 ISCU-212ENST00000547005 795 ntTSL 3 BASIC37.35■■■■□ 3.57
CUX2O14529 AC008694.1-202ENST00000636953 945 ntBASIC37.35■■■■□ 3.57
CUX2O14529 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
CUX2O14529 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC37.35■■■■□ 3.57
CUX2O14529 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CUX2O14529 AC010141.3-201ENST00000456659 717 ntBASIC37.34■■■■□ 3.57
CUX2O14529 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC37.34■■■■□ 3.57
CUX2O14529 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC37.34■■■■□ 3.57
CUX2O14529 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
CUX2O14529 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC37.33■■■■□ 3.57
CUX2O14529 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC37.33■■■■□ 3.57
CUX2O14529 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CUX2O14529 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CUX2O14529 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CUX2O14529 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC37.33■■■■□ 3.57
CUX2O14529 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CUX2O14529 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CUX2O14529 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
CUX2O14529 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.56
CUX2O14529 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
CUX2O14529 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC37.32■■■■□ 3.56
CUX2O14529 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
CUX2O14529 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC37.31■■■■□ 3.56
CUX2O14529 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC37.31■■■■□ 3.56
CUX2O14529 RN7SL850P-201ENST00000579959 291 ntBASIC37.31■■■■□ 3.56
CUX2O14529 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
CUX2O14529 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC37.3■■■■□ 3.56
CUX2O14529 ASL-203ENST00000380839 1765 ntTSL 5 BASIC37.3■■■■□ 3.56
CUX2O14529 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC37.3■■■■□ 3.56
CUX2O14529 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
CUX2O14529 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC37.3■■■■□ 3.56
CUX2O14529 CD177P1-201ENST00000606252 935 ntBASIC37.3■■■■□ 3.56
CUX2O14529 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC37.3■■■■□ 3.56
CUX2O14529 AC144652.1-201ENST00000609974 1624 ntBASIC37.3■■■■□ 3.56
CUX2O14529 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CUX2O14529 ARMC10P1-201ENST00000313754 855 ntBASIC37.29■■■■□ 3.56
CUX2O14529 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
CUX2O14529 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC37.29■■■■□ 3.56
CUX2O14529 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
CUX2O14529 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC37.29■■■■□ 3.56
CUX2O14529 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC37.29■■■■□ 3.56
CUX2O14529 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC37.29■■■■□ 3.56
CUX2O14529 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
CUX2O14529 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC37.29■■■■□ 3.56
CUX2O14529 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC37.29■■■■□ 3.56
CUX2O14529 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
CUX2O14529 AC138907.5-202ENST00000569484 235 ntBASIC37.28■■■■□ 3.56
CUX2O14529 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC37.28■■■■□ 3.56
CUX2O14529 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
CUX2O14529 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CUX2O14529 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CUX2O14529 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CUX2O14529 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
CUX2O14529 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
CUX2O14529 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC37.27■■■■□ 3.56
CUX2O14529 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC37.27■■■■□ 3.56
CUX2O14529 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
CUX2O14529 EI24-211ENST00000534546 1544 ntTSL 2 BASIC37.27■■■■□ 3.56
CUX2O14529 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC37.27■■■■□ 3.56
CUX2O14529 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
CUX2O14529 TPM1-226ENST00000560959 925 ntTSL 2 BASIC37.26■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms