Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RTCAO00442 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RTCAO00442 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RTCAO00442 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.5■□□□□ 0.87
RTCAO00442 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.5■□□□□ 0.87
RTCAO00442 SMUG1P1-201ENST00000590640 811 ntBASIC20.5■□□□□ 0.87
RTCAO00442 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.5■□□□□ 0.87
RTCAO00442 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.5■□□□□ 0.87
RTCAO00442 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTCAO00442 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCAO00442 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCAO00442 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.49■□□□□ 0.87
RTCAO00442 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.49■□□□□ 0.87
RTCAO00442 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTCAO00442 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCAO00442 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCAO00442 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RTCAO00442 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.49■□□□□ 0.87
RTCAO00442 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.49■□□□□ 0.87
RTCAO00442 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.49■□□□□ 0.87
RTCAO00442 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTCAO00442 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.48■□□□□ 0.87
RTCAO00442 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.48■□□□□ 0.87
RTCAO00442 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 AP004607.7-201ENST00000527152 1677 ntBASIC20.48■□□□□ 0.87
RTCAO00442 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTCAO00442 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.47■□□□□ 0.87
RTCAO00442 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
RTCAO00442 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.47■□□□□ 0.87
RTCAO00442 AC105233.4-201ENST00000642045 216 ntBASIC20.47■□□□□ 0.87
RTCAO00442 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 AC010542.4-201ENST00000563151 1910 ntBASIC20.47■□□□□ 0.87
RTCAO00442 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTCAO00442 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTCAO00442 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.46■□□□□ 0.87
RTCAO00442 AC105265.2-201ENST00000467189 838 ntBASIC20.46■□□□□ 0.87
RTCAO00442 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.46■□□□□ 0.87
RTCAO00442 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.46■□□□□ 0.87
RTCAO00442 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.46■□□□□ 0.87
RTCAO00442 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTCAO00442 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.45■□□□□ 0.86
RTCAO00442 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.45■□□□□ 0.86
RTCAO00442 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.45■□□□□ 0.86
RTCAO00442 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTCAO00442 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 MIR572-201ENST00000384983 95 ntBASIC20.44■□□□□ 0.86
RTCAO00442 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.44■□□□□ 0.86
RTCAO00442 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.44■□□□□ 0.86
RTCAO00442 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.44■□□□□ 0.86
RTCAO00442 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.44■□□□□ 0.86
RTCAO00442 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms