Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.41■■□□□ 1.66
TMEM88BA6NKF7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 AC010980.2-201ENST00000587099 1412 ntBASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM88BA6NKF7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 C1QBPP2-201ENST00000528754 825 ntBASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM88BA6NKF7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TMEM88BA6NKF7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 BX088651.1-201ENST00000540551 451 ntBASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 AC008403.3-201ENST00000598924 454 ntBASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM88BA6NKF7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 CYP2T3P-201ENST00000601990 817 ntBASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM88BA6NKF7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 AC135731.1-201ENST00000569415 2548 ntBASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TMEM88BA6NKF7 DUSP8P5-201ENST00000422884 1815 ntBASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
TMEM88BA6NKF7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms