Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT1A5YKK6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.77■□□□□ 0.92
CNOT1A5YKK6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.77■□□□□ 0.92
CNOT1A5YKK6 REXO1L12P-201ENST00000622156 912 ntBASIC20.77■□□□□ 0.92
CNOT1A5YKK6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT1A5YKK6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT1A5YKK6 DUSP8P5-201ENST00000422884 1815 ntBASIC20.77■□□□□ 0.91
CNOT1A5YKK6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CNOT1A5YKK6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CNOT1A5YKK6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.77■□□□□ 0.91
CNOT1A5YKK6 AC093787.1-201ENST00000450396 207 ntBASIC20.77■□□□□ 0.91
CNOT1A5YKK6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.77■□□□□ 0.91
CNOT1A5YKK6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 OXCT2P1-201ENST00000447263 1535 ntBASIC20.76■□□□□ 0.91
CNOT1A5YKK6 AC079630.1-202ENST00000618127 1840 ntBASIC20.76■□□□□ 0.91
CNOT1A5YKK6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 AL121749.1-202ENST00000609313 2153 ntBASIC20.76■□□□□ 0.91
CNOT1A5YKK6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT1A5YKK6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT1A5YKK6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 AL162412.1-201ENST00000567129 965 ntBASIC20.74■□□□□ 0.91
CNOT1A5YKK6 Z99916.2-201ENST00000604037 246 ntBASIC20.74■□□□□ 0.91
CNOT1A5YKK6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CNOT1A5YKK6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 AC069236.1-201ENST00000604339 616 ntBASIC20.73■□□□□ 0.91
CNOT1A5YKK6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT1A5YKK6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 BX088651.1-201ENST00000540551 451 ntBASIC20.72■□□□□ 0.91
CNOT1A5YKK6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.72■□□□□ 0.91
CNOT1A5YKK6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 DUSP8P4-201ENST00000399538 1761 ntBASIC20.71■□□□□ 0.91
CNOT1A5YKK6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 SNORA78-201ENST00000459373 127 ntBASIC20.71■□□□□ 0.91
CNOT1A5YKK6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms