Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCDC162PA2VCL2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC162PA2VCL2 AC010542.4-201ENST00000563151 1910 ntBASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 SUDS3P1-201ENST00000505831 966 ntBASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 TSPY26P-201ENST00000476365 1326 ntBASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC162PA2VCL2 RASA4CP-201ENST00000424092 1398 ntBASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 AC026471.6-201ENST00000622954 1905 ntBASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC162PA2VCL2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 AC091305.1-201ENST00000479476 895 ntBASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 SMUG1P1-201ENST00000590640 811 ntBASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCDC162PA2VCL2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC162PA2VCL2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC162PA2VCL2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 AP004607.7-201ENST00000527152 1677 ntBASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC162PA2VCL2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC162PA2VCL2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC162PA2VCL2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms