Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 MIR572-201ENST00000384983 95 ntBASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AL162430.1-201ENST00000480705 870 ntBASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV4S1A1TA0A5B7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 FBXW4P1-201ENST00000426721 2239 ntBASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AP005435.1-201ENST00000529293 1178 ntBASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AC034268.1-201ENST00000441047 882 ntBASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 YBX1P1-201ENST00000445822 960 ntBASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AL354811.1-201ENST00000610286 706 ntBASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AC012414.1-201ENST00000556676 535 ntBASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MIR6084-201ENST00000622012 110 ntBASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LINC01960-201ENST00000563759 1884 ntBASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms