Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV41A0A0B4J266 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV41A0A0B4J266 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV41A0A0B4J266 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV41A0A0B4J266 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 AC009237.3-201ENST00000393279 1427 ntBASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 AC092053.2-201ENST00000640557 1818 ntBASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV41A0A0B4J266 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.89■□□□□ 0.3
TRAV41A0A0B4J266 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV41A0A0B4J266 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 YBX1P1-201ENST00000445822 960 ntBASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV41A0A0B4J266 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV41A0A0B4J266 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 AC123595.1-201ENST00000440769 1046 ntBASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 LINC02228-203ENST00000641970 1355 ntBASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV41A0A0B4J266 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV41A0A0B4J266 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms