Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC068587.7-201ENST00000641602 218 ntBASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV3-43A0A0B4J1X8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC008406.3-201ENST00000620001 1374 ntBASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV3-43A0A0B4J1X8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AL137060.1-201ENST00000618151 2648 ntBASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.79■□□□□ 0.44
IGHV3-43A0A0B4J1X8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 MIR4767-201ENST00000582827 78 ntBASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.78■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC026471.6-201ENST00000622954 1905 ntBASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AC024257.2-201ENST00000549699 147 ntBASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 AL136162.1-201ENST00000607711 1078 ntBASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGHV3-43A0A0B4J1X8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.77■□□□□ 0.43
IGHV3-43A0A0B4J1X8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
IGHV3-43A0A0B4J1X8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV3-43A0A0B4J1X8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 OXCT2P1-201ENST00000447263 1535 ntBASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms