Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL390726.1-201ENST00000451357 202 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC005011.1-201ENST00000455206 210 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC138956.2-201ENST00000512934 528 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CETN3-204ENST00000522565 867 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AP003392.3-201ENST00000531886 667 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC005336.1-201ENST00000585431 1243 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC104365.2-201ENST00000586383 740 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC024884.2-201ENST00000610448 1247 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 MIR7704-201ENST00000610524 59 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 KRT25-201ENST00000312150 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 BEST3-204ENST00000476098 1692 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 LRRC46-201ENST00000269025 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 PPP2R3C-201ENST00000261475 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 SLC22A14-202ENST00000448498 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 NPAP1P3-201ENST00000432327 1586 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 ZNF540-210ENST00000592533 3147 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 INTS14-202ENST00000420799 1741 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 GOSR2-219ENST00000638697 1705 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AC104852.1-201ENST00000518921 1459 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 PSMD1-201ENST00000308696 3326 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 SLC22A16-201ENST00000330550 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 GPS2-202ENST00000389167 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AL355482.1-201ENST00000411509 2463 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 DPCD-201ENST00000370147 641 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 C10orf99-201ENST00000372126 888 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 MIR602-201ENST00000384960 98 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 IGLV8OR8-1-201ENST00000399730 352 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 RRM2P3-201ENST00000426279 1163 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 STYXL1-206ENST00000431581 1147 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 SERBP1P2-201ENST00000436888 1164 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 TMX3-202ENST00000443099 913 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AC073188.5-201ENST00000451103 673 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AL139021.1-201ENST00000556734 436 ntTSL 3 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AL136298.3-201ENST00000556746 445 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 RN7SL5P-201ENST00000581458 321 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AC131055.2-201ENST00000610586 248 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 AC008735.4-201ENST00000614815 608 ntBASIC12.59□□□□□ -0.39
LMO3Q8TAP4 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 ADAM2-203ENST00000379853 2125 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 KRBA1-203ENST00000485033 3434 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
LMO3Q8TAP4 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 AC093330.2-201ENST00000624814 3998 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 SPDYA-201ENST00000334056 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 B9D1-204ENST00000395616 733 ntTSL 3 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 DICER1-AS1-201ENST00000435343 723 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms