Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CENPO-206ENST00000473706 4272 ntTSL 2 BASIC10.89□□□□□ -0.67
P04436 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
P04436 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 UGT3A1-202ENST00000333811 1114 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 OR4C12-201ENST00000335238 1063 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P04436 RNA5SP324-201ENST00000365177 108 ntBASIC10.89□□□□□ -0.67
P04436 MGST3-201ENST00000367883 706 ntTSL 3 BASIC10.89□□□□□ -0.67
P04436 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC10.89□□□□□ -0.67
P04436 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
P04436 B9D1-204ENST00000395616 733 ntTSL 3 BASIC10.89□□□□□ -0.67
P04436 FEN1P1-201ENST00000401028 1145 ntBASIC10.89□□□□□ -0.67
P04436 KRTAP13-5P-201ENST00000418755 499 ntBASIC10.89□□□□□ -0.67
P04436 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 HNRNPA1P59-201ENST00000430583 918 ntBASIC10.89□□□□□ -0.67
P04436 LHFPL3-AS1-206ENST00000449764 1196 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 SURF6P1-201ENST00000451854 827 ntBASIC10.89□□□□□ -0.67
P04436 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC10.89□□□□□ -0.67
P04436 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC10.89□□□□□ -0.67
P04436 IGKV2D-24-201ENST00000462693 390 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P04436 LINC01140-203ENST00000469312 1298 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC10.89□□□□□ -0.67
P04436 IGKV2-24-201ENST00000484817 390 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P04436 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC10.89□□□□□ -0.67
P04436 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC10.89□□□□□ -0.67
P04436 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC10.89□□□□□ -0.67
P04436 AC105036.3-204ENST00000568707 789 ntTSL 2 BASIC10.89□□□□□ -0.67
P04436 AC087222.1-201ENST00000571113 504 ntBASIC10.89□□□□□ -0.67
P04436 AL355353.1-201ENST00000604014 330 ntBASIC10.89□□□□□ -0.67
P04436 BX510359.6-201ENST00000615765 343 ntBASIC10.89□□□□□ -0.67
P04436 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC10.89□□□□□ -0.67
P04436 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04436 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 AC112176.1-201ENST00000565428 3024 ntBASIC10.89□□□□□ -0.67
P04436 ISG20L2-201ENST00000313146 3303 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
P04436 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.89□□□□□ -0.67
P04436 UBA3-203ENST00000415609 2004 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
P04436 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC10.89□□□□□ -0.67
P04436 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 PSMC1P1-201ENST00000478110 1320 ntBASIC10.88□□□□□ -0.67
P04436 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
P04436 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 GNG12-AS1-203ENST00000420587 2232 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 AC080128.2-201ENST00000641520 11863 ntBASIC10.88□□□□□ -0.67
P04436 SUV39H1-201ENST00000337852 2978 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 GPHA2-201ENST00000279168 747 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 ZNF140-201ENST00000319849 596 ntTSL 5 BASIC10.88□□□□□ -0.67
P04436 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 SOD1-202ENST00000389995 865 ntTSL 3 BASIC10.88□□□□□ -0.67
P04436 PPIP5K1-207ENST00000396923 5636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC10.88□□□□□ -0.67
P04436 AL591503.3-201ENST00000423038 635 ntBASIC10.88□□□□□ -0.67
P04436 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC10.88□□□□□ -0.67
P04436 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 FAM238B-203ENST00000434458 880 ntTSL 3 BASIC10.88□□□□□ -0.67
P04436 AL590440.1-201ENST00000436960 428 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 AC062028.2-201ENST00000437876 856 ntBASIC10.88□□□□□ -0.67
P04436 AP000350.1-201ENST00000443377 532 ntBASIC10.88□□□□□ -0.67
P04436 AL365258.2-201ENST00000447479 472 ntBASIC10.88□□□□□ -0.67
P04436 RPLP0P2-204ENST00000490750 961 ntBASIC10.88□□□□□ -0.67
P04436 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 AC136628.2-201ENST00000505650 1142 ntBASIC10.88□□□□□ -0.67
P04436 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P04436 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC10.88□□□□□ -0.67
P04436 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04436 AL133467.2-201ENST00000555032 1714 ntTSL 4 BASIC10.88□□□□□ -0.67
P04436 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC10.88□□□□□ -0.67
P04436 AC026826.2-201ENST00000560455 214 ntBASIC10.88□□□□□ -0.67
P04436 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC10.88□□□□□ -0.67
P04436 AC022748.2-203ENST00000564933 1432 ntBASIC10.88□□□□□ -0.67
P04436 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC10.88□□□□□ -0.67
P04436 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC10.88□□□□□ -0.67
P04436 AC113385.3-201ENST00000621479 747 ntBASIC10.88□□□□□ -0.67
P04436 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P04436 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.88□□□□□ -0.67
P04436 QARS-202ENST00000414533 2412 ntTSL 2 BASIC10.88□□□□□ -0.67
P04436 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
P04436 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms