Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 EFCAB13-201ENST00000331493 3931 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 AL078604.2-201ENST00000430078 2002 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC009159.4-201ENST00000624606 2031 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 NFYB-201ENST00000240055 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 ZNF461-213ENST00000614133 1692 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 GMEB2-202ENST00000370069 4011 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 GPR132-201ENST00000329797 3660 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC026801.3-201ENST00000606401 1565 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 BPIFA3-201ENST00000375452 983 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SLC1A1P43005 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 KIF9-204ENST00000425853 740 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC010240.1-201ENST00000429606 459 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 ARHGAP26-AS1-202ENST00000433595 978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 AL161727.1-201ENST00000457409 530 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC096919.1-201ENST00000472730 652 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 AC136632.1-201ENST00000477964 591 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 ALG10-202ENST00000538927 571 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 RAB42P1-201ENST00000555078 316 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 LINC01198-206ENST00000595532 1125 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 AL513485.1-201ENST00000617915 845 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC12.45□□□□□ -0.42
SLC1A1P43005 AC007610.4-201ENST00000623307 2125 ntBASIC12.45□□□□□ -0.42
SLC1A1P43005 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 PACSIN1-201ENST00000244458 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 TEX2-204ENST00000583097 4852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 TEX2-210ENST00000615733 4852 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SLC1A1P43005 TGM5-202ENST00000349114 1958 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 GOLM1-202ENST00000388711 3022 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 KIR2DL4-201ENST00000345540 1447 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SLC1A1P43005 RIBC1-204ENST00000457095 1949 ntTSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SLC1A1P43005 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 FERMT2-205ENST00000553373 2064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 SGK3-202ENST00000396596 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 ARHGAP30-202ENST00000368015 3887 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SLC1A1P43005 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 GNRH2-201ENST00000245983 425 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 CLDN17-201ENST00000286808 1193 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SLC1A1P43005 GNRH2-202ENST00000359100 404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SLC1A1P43005 DMRTC1B-203ENST00000373533 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 AC073254.1-201ENST00000415506 1162 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 SGO1-204ENST00000417364 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 SGO1-207ENST00000425061 1213 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 SGO1-211ENST00000452020 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 RN7SL483P-201ENST00000478417 285 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 Z70280.1-201ENST00000490943 295 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 AC136628.2-201ENST00000505650 1142 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.44□□□□□ -0.42
SLC1A1P43005 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.44□□□□□ -0.42
SLC1A1P43005 ABCC6P1-203ENST00000565566 1170 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms