Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 HHAT-208ENST00000545154 3507 ntTSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 EPHB2-202ENST00000374630 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SLC1A1P43005 ZNF185-210ENST00000454925 3191 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SLC1A1P43005 LILRB2-201ENST00000314446 2397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 Z94160.1-201ENST00000445088 1965 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 PTPRN-204ENST00000423636 3313 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SLC1A1P43005 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.4
SLC1A1P43005 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 AC078925.3-201ENST00000623434 2500 ntBASIC12.52□□□□□ -0.4
SLC1A1P43005 DPP3P1-201ENST00000508984 2063 ntBASIC12.52□□□□□ -0.4
SLC1A1P43005 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 LINC01018-201ENST00000505626 3036 ntTSL 2 BASIC12.52□□□□□ -0.4
SLC1A1P43005 MOB4-202ENST00000323303 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SLC1A1P43005 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 PPHLN1-205ENST00000395568 2170 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SLC1A1P43005 ATP1A3-208ENST00000545399 3618 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SLC1A1P43005 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 MYBPC3-201ENST00000256993 4217 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 MYBPC3-202ENST00000399249 4217 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 MIR339-201ENST00000362153 94 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC12.52□□□□□ -0.41
SLC1A1P43005 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SLC1A1P43005 AL355334.1-201ENST00000417713 215 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 APRT-202ENST00000426324 664 ntTSL 2 BASIC12.52□□□□□ -0.41
SLC1A1P43005 ACTG1P10-201ENST00000428275 1082 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 TMEM256P1-201ENST00000430550 340 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 RN7SL186P-201ENST00000466485 297 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 AADACP1-203ENST00000471766 707 ntTSL 3 BASIC12.52□□□□□ -0.41
SLC1A1P43005 RN7SL672P-201ENST00000474091 317 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 RN7SL386P-201ENST00000485776 297 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.52□□□□□ -0.41
SLC1A1P43005 MBP-230ENST00000528160 584 ntTSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 CCND2-AS1-201ENST00000539135 555 ntTSL 3 BASIC12.52□□□□□ -0.41
SLC1A1P43005 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SLC1A1P43005 FGF11-205ENST00000575398 990 ntTSL 2 BASIC12.52□□□□□ -0.41
SLC1A1P43005 AC103810.4-201ENST00000578601 257 ntBASIC12.52□□□□□ -0.41
SLC1A1P43005 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SLC1A1P43005 AL031601.2-201ENST00000622823 457 ntTSL 3 BASIC12.52□□□□□ -0.41
SLC1A1P43005 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SLC1A1P43005 FRMD1-201ENST00000283309 3067 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SLC1A1P43005 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SLC1A1P43005 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SLC1A1P43005 ENOPH1-204ENST00000610545 1542 ntTSL 5 BASIC12.52□□□□□ -0.41
SLC1A1P43005 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SLC1A1P43005 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 CAMK1G-202ENST00000361322 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 KCNA2-207ENST00000638532 2426 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 NCAM1-210ENST00000529356 1843 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 HOXA-AS2-201ENST00000517550 2022 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 C3orf20-203ENST00000435614 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 AC114760.2-201ENST00000606818 2065 ntTSL 4 BASIC12.51□□□□□ -0.41
SLC1A1P43005 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SLC1A1P43005 AL591499.1-201ENST00000307155 1153 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SLC1A1P43005 LINC00539-202ENST00000423575 699 ntTSL 3 BASIC12.51□□□□□ -0.41
SLC1A1P43005 AC006987.4-201ENST00000430032 279 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SLC1A1P43005 AL356056.2-202ENST00000430188 553 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC12.51□□□□□ -0.41
SLC1A1P43005 SNORD10-201ENST00000459579 142 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 RN7SL105P-201ENST00000475661 299 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.51□□□□□ -0.41
SLC1A1P43005 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC12.51□□□□□ -0.41
SLC1A1P43005 AC113347.2-201ENST00000512350 279 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 LYPLA1P2-201ENST00000513113 691 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 AC135977.1-201ENST00000526165 959 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 AC090825.2-201ENST00000557959 739 ntBASIC12.51□□□□□ -0.41
SLC1A1P43005 LINC02184-201ENST00000568121 552 ntTSL 2 BASIC12.51□□□□□ -0.41
SLC1A1P43005 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms