Protein–RNA interactions for Protein: U3KQ87

Uncharacterized protein, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQ87 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.09■□□□□ 0.49
U3KQ87 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
U3KQ87 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.09■□□□□ 0.49
U3KQ87 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
U3KQ87 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 AC087742.1-201ENST00000575880 1738 ntBASIC18.09■□□□□ 0.49
U3KQ87 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
U3KQ87 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U3KQ87 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.08■□□□□ 0.49
U3KQ87 AC026471.1-201ENST00000564629 3026 ntBASIC18.08■□□□□ 0.49
U3KQ87 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.08■□□□□ 0.49
U3KQ87 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.08■□□□□ 0.48
U3KQ87 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 SPCS2P3-201ENST00000500401 656 ntBASIC18.08■□□□□ 0.48
U3KQ87 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 AC011551.1-201ENST00000614101 683 ntBASIC18.08■□□□□ 0.48
U3KQ87 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
U3KQ87 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.08■□□□□ 0.48
U3KQ87 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
U3KQ87 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.08■□□□□ 0.48
U3KQ87 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
U3KQ87 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U3KQ87 AFG3L1P-217ENST00000557444 2447 ntBASIC18.08■□□□□ 0.48
U3KQ87 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
U3KQ87 Z98882.1-201ENST00000622160 2253 ntBASIC18.07■□□□□ 0.48
U3KQ87 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.07■□□□□ 0.48
U3KQ87 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.07■□□□□ 0.48
U3KQ87 ALDH1A3-203ENST00000557963 1670 ntBASIC18.07■□□□□ 0.48
U3KQ87 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.07■□□□□ 0.48
U3KQ87 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
U3KQ87 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.07■□□□□ 0.48
U3KQ87 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.07■□□□□ 0.48
U3KQ87 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
U3KQ87 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
U3KQ87 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
U3KQ87 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
U3KQ87 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
U3KQ87 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
U3KQ87 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
U3KQ87 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U3KQ87 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
U3KQ87 LONRF2P2-201ENST00000439212 571 ntBASIC18.06■□□□□ 0.48
U3KQ87 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U3KQ87 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U3KQ87 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
U3KQ87 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.05■□□□□ 0.48
U3KQ87 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
U3KQ87 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
U3KQ87 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U3KQ87 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.05■□□□□ 0.48
U3KQ87 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
U3KQ87 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
U3KQ87 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.04■□□□□ 0.48
U3KQ87 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.04■□□□□ 0.48
U3KQ87 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U3KQ87 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U3KQ87 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.04■□□□□ 0.48
U3KQ87 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U3KQ87 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.04■□□□□ 0.48
U3KQ87 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
U3KQ87 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
U3KQ87 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms