Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB13Q9Y5F0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB13Q9Y5F0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB13Q9Y5F0 AC105233.4-201ENST00000642045 216 ntBASIC23.77■■□□□ 1.4
PCDHB13Q9Y5F0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB13Q9Y5F0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB13Q9Y5F0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 AC105265.2-201ENST00000467189 838 ntBASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB13Q9Y5F0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB13Q9Y5F0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 AL034346.1-201ENST00000568244 1277 ntBASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB13Q9Y5F0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 LINC00565-201ENST00000562710 2331 ntBASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 C11orf96-202ENST00000528572 1834 ntBASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB13Q9Y5F0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 IRS3P-201ENST00000223076 1006 ntBASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB13Q9Y5F0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 AP004607.7-201ENST00000527152 1677 ntBASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB13Q9Y5F0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDHB13Q9Y5F0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB13Q9Y5F0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB13Q9Y5F0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHB13Q9Y5F0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms