Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 FP325331.1-202ENST00000623531 1380 ntBASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCL1Q9Y2P8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
RCL1Q9Y2P8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCL1Q9Y2P8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 KRT18P24-201ENST00000344739 1156 ntBASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 AC139795.1-202ENST00000500444 432 ntBASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCL1Q9Y2P8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RCL1Q9Y2P8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
RCL1Q9Y2P8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCL1Q9Y2P8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RCL1Q9Y2P8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCL1Q9Y2P8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCL1Q9Y2P8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCL1Q9Y2P8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 SNX5-217ENST00000606557 1087 ntBASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 LINC01006-201ENST00000333319 2292 ntBASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms