Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2BQ9UQN3 AC079089.2-201ENST00000531211 1277 ntBASIC21.88■■□□□ 1.09
CHMP2BQ9UQN3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2BQ9UQN3 SLC25A24-204ENST00000569674 2357 ntBASIC21.88■■□□□ 1.09
CHMP2BQ9UQN3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CHMP2BQ9UQN3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMP2BQ9UQN3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 AC026471.6-201ENST00000622954 1905 ntBASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 Z98882.1-201ENST00000622160 2253 ntBASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2BQ9UQN3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.86■■□□□ 1.09
CHMP2BQ9UQN3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2BQ9UQN3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2BQ9UQN3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 AL035685.1-201ENST00000636663 812 ntBASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP2BQ9UQN3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP2BQ9UQN3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.83■■□□□ 1.08
CHMP2BQ9UQN3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.83■■□□□ 1.08
CHMP2BQ9UQN3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 AF106564.1-201ENST00000607058 2553 ntBASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 AL356740.2-201ENST00000601559 647 ntBASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP2BQ9UQN3 OR7E47P-201ENST00000546390 1422 ntBASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms