Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.03■■□□□ 1.28
CISHQ9NSE2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.03■■□□□ 1.28
CISHQ9NSE2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CISHQ9NSE2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.03■■□□□ 1.28
CISHQ9NSE2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.03■■□□□ 1.28
CISHQ9NSE2 AP004607.7-201ENST00000527152 1677 ntBASIC23.03■■□□□ 1.28
CISHQ9NSE2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CISHQ9NSE2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 AC079834.2-201ENST00000609776 1949 ntBASIC23.02■■□□□ 1.28
CISHQ9NSE2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 AL354811.1-201ENST00000610286 706 ntBASIC23.02■■□□□ 1.28
CISHQ9NSE2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CISHQ9NSE2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.02■■□□□ 1.28
CISHQ9NSE2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CISHQ9NSE2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
CISHQ9NSE2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CISHQ9NSE2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.01■■□□□ 1.27
CISHQ9NSE2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.01■■□□□ 1.27
CISHQ9NSE2 AL358852.1-201ENST00000623174 1268 ntBASIC23.01■■□□□ 1.27
CISHQ9NSE2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CISHQ9NSE2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CISHQ9NSE2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CISHQ9NSE2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23■■□□□ 1.27
CISHQ9NSE2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23■■□□□ 1.27
CISHQ9NSE2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23■■□□□ 1.27
CISHQ9NSE2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CISHQ9NSE2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23■■□□□ 1.27
CISHQ9NSE2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23■■□□□ 1.27
CISHQ9NSE2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23■■□□□ 1.27
CISHQ9NSE2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23■■□□□ 1.27
CISHQ9NSE2 C11orf96-202ENST00000528572 1834 ntBASIC23■■□□□ 1.27
CISHQ9NSE2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23■■□□□ 1.27
CISHQ9NSE2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23■■□□□ 1.27
CISHQ9NSE2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23■■□□□ 1.27
CISHQ9NSE2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23■■□□□ 1.27
CISHQ9NSE2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CISHQ9NSE2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.99■■□□□ 1.27
CISHQ9NSE2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CISHQ9NSE2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.99■■□□□ 1.27
CISHQ9NSE2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
CISHQ9NSE2 MIR6084-201ENST00000622012 110 ntBASIC22.99■■□□□ 1.27
CISHQ9NSE2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
CISHQ9NSE2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CISHQ9NSE2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CISHQ9NSE2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 BX005040.4-201ENST00000637145 1518 ntBASIC22.98■■□□□ 1.27
CISHQ9NSE2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 FAM99A-202ENST00000538190 1989 ntBASIC22.98■■□□□ 1.27
CISHQ9NSE2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 AL034346.1-201ENST00000568244 1277 ntBASIC22.98■■□□□ 1.27
CISHQ9NSE2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 AC019069.1-201ENST00000610008 1333 ntBASIC22.98■■□□□ 1.27
CISHQ9NSE2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CISHQ9NSE2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CISHQ9NSE2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.97■■□□□ 1.27
CISHQ9NSE2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.97■■□□□ 1.27
CISHQ9NSE2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CISHQ9NSE2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms