Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 AC239859.2-201ENST00000444165 318 ntBASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 CA15P2-201ENST00000611168 834 ntBASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 AC241377.3-202ENST00000626088 1088 ntBASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 AC241585.3-202ENST00000628937 1088 ntBASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 AC245100.8-202ENST00000629247 1058 ntBASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHB16Q9NRJ7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHB16Q9NRJ7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB16Q9NRJ7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 AL499627.2-201ENST00000606283 725 ntBASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB16Q9NRJ7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 TSPY9P-201ENST00000440215 945 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 TSPY11P-201ENST00000442607 1045 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 MIR6724-1-201ENST00000616420 92 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 MIR6724-2-201ENST00000616483 92 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 MIR6724-4-201ENST00000617390 92 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 MIR6724-3-201ENST00000622482 92 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 AL117332.1-201ENST00000622628 974 ntBASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB16Q9NRJ7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHB16Q9NRJ7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms