Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEUROD4Q9HD90 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NEUROD4Q9HD90 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEUROD4Q9HD90 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEUROD4Q9HD90 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 AC005837.3-201ENST00000612163 286 ntBASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEUROD4Q9HD90 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 AC010525.1-201ENST00000585559 441 ntBASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
NEUROD4Q9HD90 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 OXCT2P1-201ENST00000447263 1535 ntBASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEUROD4Q9HD90 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 AP005435.1-201ENST00000529293 1178 ntBASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 AC110285.6-201ENST00000617652 491 ntBASIC20.27■□□□□ 0.84
NEUROD4Q9HD90 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NEUROD4Q9HD90 AC244015.2-201ENST00000616358 1861 ntBASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 AC096631.2-201ENST00000436136 790 ntBASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NEUROD4Q9HD90 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 AC007375.3-201ENST00000600936 2314 ntBASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEUROD4Q9HD90 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 SLC47A1P1-202ENST00000449666 945 ntBASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEUROD4Q9HD90 AL034346.1-201ENST00000568244 1277 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms