Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MRPL47Q9HD33 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 UNC93B3-201ENST00000308076 687 ntBASIC22.71■■□□□ 1.23
MRPL47Q9HD33 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MRPL47Q9HD33 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.7■■□□□ 1.23
MRPL47Q9HD33 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.7■■□□□ 1.22
MRPL47Q9HD33 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.7■■□□□ 1.22
MRPL47Q9HD33 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MRPL47Q9HD33 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 AC244015.2-201ENST00000616358 1861 ntBASIC22.68■■□□□ 1.22
MRPL47Q9HD33 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL47Q9HD33 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 BX842568.3-201ENST00000418104 571 ntBASIC22.67■■□□□ 1.22
MRPL47Q9HD33 AL034346.1-201ENST00000568244 1277 ntBASIC22.67■■□□□ 1.22
MRPL47Q9HD33 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
MRPL47Q9HD33 AC007375.3-201ENST00000600936 2314 ntBASIC22.66■■□□□ 1.22
MRPL47Q9HD33 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 AC008406.3-201ENST00000620001 1374 ntBASIC22.66■■□□□ 1.22
MRPL47Q9HD33 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 MIR4767-201ENST00000582827 78 ntBASIC22.66■■□□□ 1.22
MRPL47Q9HD33 AL136162.1-201ENST00000607711 1078 ntBASIC22.66■■□□□ 1.22
MRPL47Q9HD33 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL47Q9HD33 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL47Q9HD33 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.64■■□□□ 1.22
MRPL47Q9HD33 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MRPL47Q9HD33 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MRPL47Q9HD33 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.64■■□□□ 1.21
MRPL47Q9HD33 AC024257.2-201ENST00000549699 147 ntBASIC22.64■■□□□ 1.21
MRPL47Q9HD33 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MRPL47Q9HD33 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms