Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.6■■□□□ 1.05
MRM3Q9HC36 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MRM3Q9HC36 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MRM3Q9HC36 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.59■■□□□ 1.05
MRM3Q9HC36 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.59■■□□□ 1.05
MRM3Q9HC36 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.59■■□□□ 1.05
MRM3Q9HC36 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.59■■□□□ 1.05
MRM3Q9HC36 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.59■■□□□ 1.05
MRM3Q9HC36 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRM3Q9HC36 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRM3Q9HC36 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRM3Q9HC36 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.05
MRM3Q9HC36 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRM3Q9HC36 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRM3Q9HC36 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MRM3Q9HC36 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRM3Q9HC36 AC024257.2-201ENST00000549699 147 ntBASIC21.58■■□□□ 1.05
MRM3Q9HC36 AL139246.5-201ENST00000606645 996 ntBASIC21.58■■□□□ 1.05
MRM3Q9HC36 AL136162.1-201ENST00000607711 1078 ntBASIC21.58■■□□□ 1.05
MRM3Q9HC36 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.58■■□□□ 1.05
MRM3Q9HC36 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
MRM3Q9HC36 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.58■■□□□ 1.04
MRM3Q9HC36 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.58■■□□□ 1.04
MRM3Q9HC36 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MRM3Q9HC36 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
MRM3Q9HC36 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 AC133561.4-201ENST00000566112 224 ntBASIC21.57■■□□□ 1.04
MRM3Q9HC36 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 AC233992.3-201ENST00000607491 485 ntBASIC21.57■■□□□ 1.04
MRM3Q9HC36 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MRM3Q9HC36 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
MRM3Q9HC36 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
MRM3Q9HC36 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 AC135279.3-201ENST00000610945 1311 ntBASIC21.56■■□□□ 1.04
MRM3Q9HC36 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.56■■□□□ 1.04
MRM3Q9HC36 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MRM3Q9HC36 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
MRM3Q9HC36 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
MRM3Q9HC36 AC007375.3-201ENST00000600936 2314 ntBASIC21.55■■□□□ 1.04
MRM3Q9HC36 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.55■■□□□ 1.04
MRM3Q9HC36 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.55■■□□□ 1.04
MRM3Q9HC36 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.55■■□□□ 1.04
MRM3Q9HC36 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 AC026471.6-201ENST00000622954 1905 ntBASIC21.55■■□□□ 1.04
MRM3Q9HC36 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MRM3Q9HC36 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.54■■□□□ 1.04
MRM3Q9HC36 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.54■■□□□ 1.04
MRM3Q9HC36 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.54■■□□□ 1.04
MRM3Q9HC36 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MRM3Q9HC36 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MRM3Q9HC36 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MRM3Q9HC36 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 AC104564.3-201ENST00000582367 638 ntBASIC21.53■■□□□ 1.04
MRM3Q9HC36 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MRM3Q9HC36 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MRM3Q9HC36 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms