Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC079089.2-201ENST00000531211 1277 ntBASIC21.53■■□□□ 1.04
CCDC68Q9H2F9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC68Q9H2F9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC68Q9H2F9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC68Q9H2F9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC68Q9H2F9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC68Q9H2F9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 AC010525.1-201ENST00000585559 441 ntBASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC68Q9H2F9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC68Q9H2F9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CCDC68Q9H2F9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 AC010141.3-201ENST00000456659 717 ntBASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC68Q9H2F9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC68Q9H2F9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC68Q9H2F9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 OR7E47P-201ENST00000546390 1422 ntBASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC68Q9H2F9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 UNC93B3-201ENST00000308076 687 ntBASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 SLC47A1P1-202ENST00000449666 945 ntBASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC68Q9H2F9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms