Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
VPS11Q9H270 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS11Q9H270 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS11Q9H270 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS11Q9H270 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS11Q9H270 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 AL499627.2-201ENST00000606283 725 ntBASIC21.59■■□□□ 1.05
VPS11Q9H270 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS11Q9H270 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS11Q9H270 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS11Q9H270 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS11Q9H270 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS11Q9H270 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
VPS11Q9H270 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.58■■□□□ 1.05
VPS11Q9H270 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VPS11Q9H270 AL117332.1-201ENST00000622628 974 ntBASIC21.58■■□□□ 1.05
VPS11Q9H270 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS11Q9H270 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.58■■□□□ 1.04
VPS11Q9H270 Z98882.1-201ENST00000622160 2253 ntBASIC21.58■■□□□ 1.04
VPS11Q9H270 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS11Q9H270 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
VPS11Q9H270 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.58■■□□□ 1.04
VPS11Q9H270 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS11Q9H270 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
VPS11Q9H270 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
VPS11Q9H270 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
VPS11Q9H270 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.57■■□□□ 1.04
VPS11Q9H270 AL451085.2-201ENST00000605085 799 ntBASIC21.57■■□□□ 1.04
VPS11Q9H270 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.57■■□□□ 1.04
VPS11Q9H270 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS11Q9H270 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
VPS11Q9H270 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.56■■□□□ 1.04
VPS11Q9H270 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS11Q9H270 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS11Q9H270 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
VPS11Q9H270 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
VPS11Q9H270 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS11Q9H270 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS11Q9H270 MIR6724-1-201ENST00000616420 92 ntBASIC21.56■■□□□ 1.04
VPS11Q9H270 MIR6724-2-201ENST00000616483 92 ntBASIC21.56■■□□□ 1.04
VPS11Q9H270 MIR6724-4-201ENST00000617390 92 ntBASIC21.56■■□□□ 1.04
VPS11Q9H270 MIR6724-3-201ENST00000622482 92 ntBASIC21.56■■□□□ 1.04
VPS11Q9H270 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS11Q9H270 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS11Q9H270 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
VPS11Q9H270 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
VPS11Q9H270 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS11Q9H270 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS11Q9H270 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VPS11Q9H270 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 UNC93B8-201ENST00000511903 705 ntBASIC21.55■■□□□ 1.04
VPS11Q9H270 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS11Q9H270 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS11Q9H270 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS11Q9H270 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VPS11Q9H270 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS11Q9H270 FEM1AP4-201ENST00000443167 1987 ntBASIC21.54■■□□□ 1.04
VPS11Q9H270 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS11Q9H270 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS11Q9H270 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
VPS11Q9H270 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS11Q9H270 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS11Q9H270 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS11Q9H270 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS11Q9H270 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms