Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
FAM49AQ9H0Q0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FAM49AQ9H0Q0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FAM49AQ9H0Q0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.77■■□□□ 1.4
FAM49AQ9H0Q0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
FAM49AQ9H0Q0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FAM49AQ9H0Q0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FAM49AQ9H0Q0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
FAM49AQ9H0Q0 MFSD11-216ENST00000590393 1141 ntBASIC23.75■■□□□ 1.39
FAM49AQ9H0Q0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
FAM49AQ9H0Q0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 UBE2DNL-204ENST00000602536 740 ntBASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.74■■□□□ 1.39
FAM49AQ9H0Q0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 MIR663A-201ENST00000385250 93 ntBASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 AP001160.3-201ENST00000601484 763 ntBASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM49AQ9H0Q0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM49AQ9H0Q0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM49AQ9H0Q0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.7■■□□□ 1.38
FAM49AQ9H0Q0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
FAM49AQ9H0Q0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
FAM49AQ9H0Q0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
FAM49AQ9H0Q0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms