Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.84■■□□□ 1.73
LSG1Q9H089 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSG1Q9H089 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSG1Q9H089 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.84■■□□□ 1.73
LSG1Q9H089 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.84■■□□□ 1.73
LSG1Q9H089 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LSG1Q9H089 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSG1Q9H089 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.84■■□□□ 1.73
LSG1Q9H089 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
LSG1Q9H089 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.84■■□□□ 1.73
LSG1Q9H089 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
LSG1Q9H089 AL031432.3-201ENST00000607698 485 ntBASIC25.84■■□□□ 1.73
LSG1Q9H089 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.84■■□□□ 1.73
LSG1Q9H089 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
LSG1Q9H089 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
LSG1Q9H089 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
LSG1Q9H089 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
LSG1Q9H089 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LSG1Q9H089 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.83■■□□□ 1.73
LSG1Q9H089 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
LSG1Q9H089 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LSG1Q9H089 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.83■■□□□ 1.73
LSG1Q9H089 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LSG1Q9H089 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
LSG1Q9H089 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
LSG1Q9H089 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
LSG1Q9H089 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
LSG1Q9H089 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.82■■□□□ 1.72
LSG1Q9H089 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LSG1Q9H089 AP001330.3-201ENST00000520123 633 ntBASIC25.82■■□□□ 1.72
LSG1Q9H089 AC008764.7-201ENST00000593779 1081 ntBASIC25.82■■□□□ 1.72
LSG1Q9H089 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.82■■□□□ 1.72
LSG1Q9H089 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.81■■□□□ 1.72
LSG1Q9H089 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.81■■□□□ 1.72
LSG1Q9H089 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.81■■□□□ 1.72
LSG1Q9H089 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.81■■□□□ 1.72
LSG1Q9H089 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.81■■□□□ 1.72
LSG1Q9H089 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSG1Q9H089 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LSG1Q9H089 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.8■■□□□ 1.72
LSG1Q9H089 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
LSG1Q9H089 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
LSG1Q9H089 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LSG1Q9H089 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
LSG1Q9H089 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LSG1Q9H089 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.8■■□□□ 1.72
LSG1Q9H089 AC099791.1-201ENST00000416440 715 ntBASIC25.8■■□□□ 1.72
LSG1Q9H089 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.8■■□□□ 1.72
LSG1Q9H089 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.8■■□□□ 1.72
LSG1Q9H089 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
LSG1Q9H089 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LSG1Q9H089 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.79■■□□□ 1.72
LSG1Q9H089 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
LSG1Q9H089 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LSG1Q9H089 IGHV3-19-201ENST00000521488 291 ntBASIC25.79■■□□□ 1.72
LSG1Q9H089 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.79■■□□□ 1.72
LSG1Q9H089 SMUG1P1-201ENST00000590640 811 ntBASIC25.79■■□□□ 1.72
LSG1Q9H089 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
LSG1Q9H089 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
LSG1Q9H089 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.79■■□□□ 1.72
LSG1Q9H089 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LSG1Q9H089 EDA-201ENST00000338901 1233 ntBASIC25.78■■□□□ 1.72
LSG1Q9H089 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.78■■□□□ 1.72
LSG1Q9H089 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LSG1Q9H089 AC126544.1-201ENST00000580842 1059 ntBASIC25.78■■□□□ 1.72
LSG1Q9H089 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LSG1Q9H089 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.78■■□□□ 1.72
LSG1Q9H089 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LSG1Q9H089 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
LSG1Q9H089 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.77■■□□□ 1.72
LSG1Q9H089 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
LSG1Q9H089 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.77■■□□□ 1.72
LSG1Q9H089 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSG1Q9H089 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSG1Q9H089 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LSG1Q9H089 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.77■■□□□ 1.72
LSG1Q9H089 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.77■■□□□ 1.72
LSG1Q9H089 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
LSG1Q9H089 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.77■■□□□ 1.72
LSG1Q9H089 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.77■■□□□ 1.72
LSG1Q9H089 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSG1Q9H089 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LSG1Q9H089 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LSG1Q9H089 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.77■■□□□ 1.72
LSG1Q9H089 MIR939-201ENST00000401314 82 ntBASIC25.76■■□□□ 1.71
LSG1Q9H089 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.76■■□□□ 1.71
LSG1Q9H089 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.76■■□□□ 1.71
LSG1Q9H089 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms