Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL512625.2-201ENST00000417533 625 ntBASIC18.2■□□□□ 0.5
FOXC2Q99958 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXC2Q99958 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXC2Q99958 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXC2Q99958 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
FOXC2Q99958 TERF1P5-201ENST00000477545 1207 ntBASIC18.2■□□□□ 0.5
FOXC2Q99958 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXC2Q99958 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXC2Q99958 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXC2Q99958 AC008694.1-202ENST00000636953 945 ntBASIC18.2■□□□□ 0.5
FOXC2Q99958 AC068338.2-201ENST00000563278 1430 ntBASIC18.2■□□□□ 0.5
FOXC2Q99958 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXC2Q99958 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXC2Q99958 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXC2Q99958 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FOXC2Q99958 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FOXC2Q99958 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXC2Q99958 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXC2Q99958 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXC2Q99958 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXC2Q99958 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
FOXC2Q99958 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXC2Q99958 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXC2Q99958 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXC2Q99958 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.19■□□□□ 0.5
FOXC2Q99958 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXC2Q99958 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXC2Q99958 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXC2Q99958 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXC2Q99958 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXC2Q99958 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.18■□□□□ 0.5
FOXC2Q99958 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXC2Q99958 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXC2Q99958 AC097658.1-201ENST00000475555 843 ntBASIC18.18■□□□□ 0.5
FOXC2Q99958 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 AC007322.4-201ENST00000509611 723 ntBASIC18.18■□□□□ 0.5
FOXC2Q99958 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXC2Q99958 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXC2Q99958 AC138907.5-202ENST00000569484 235 ntBASIC18.18■□□□□ 0.5
FOXC2Q99958 AC006058.3-201ENST00000606217 1069 ntBASIC18.18■□□□□ 0.5
FOXC2Q99958 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXC2Q99958 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXC2Q99958 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXC2Q99958 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FOXC2Q99958 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXC2Q99958 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXC2Q99958 AC128676.1-201ENST00000454392 318 ntBASIC18.17■□□□□ 0.5
FOXC2Q99958 AC069236.1-201ENST00000604339 616 ntBASIC18.17■□□□□ 0.5
FOXC2Q99958 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.17■□□□□ 0.5
FOXC2Q99958 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
FOXC2Q99958 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
FOXC2Q99958 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FOXC2Q99958 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXC2Q99958 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXC2Q99958 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXC2Q99958 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXC2Q99958 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXC2Q99958 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
FOXC2Q99958 UNC93B4-201ENST00000505679 747 ntBASIC18.16■□□□□ 0.5
FOXC2Q99958 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXC2Q99958 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXC2Q99958 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXC2Q99958 AC083880.1-201ENST00000608266 535 ntBASIC18.16■□□□□ 0.5
FOXC2Q99958 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXC2Q99958 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXC2Q99958 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FOXC2Q99958 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
FOXC2Q99958 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FOXC2Q99958 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXC2Q99958 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXC2Q99958 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXC2Q99958 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXC2Q99958 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXC2Q99958 MYC-209ENST00000641252 345 ntBASIC18.15■□□□□ 0.5
FOXC2Q99958 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXC2Q99958 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms