Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
FOXN4Q96NZ1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN4Q96NZ1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 SYT6-210ENST00000641643 1587 ntBASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 AC024257.2-201ENST00000549699 147 ntBASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN4Q96NZ1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 AC010542.4-201ENST00000563151 1910 ntBASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 AL031602.1-201ENST00000633169 911 ntBASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN4Q96NZ1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 SUDS3P1-201ENST00000505831 966 ntBASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 FAM99A-202ENST00000538190 1989 ntBASIC19.23■□□□□ 0.67
FOXN4Q96NZ1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 DUX4L19-201ENST00000557448 1267 ntBASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 AC092171.4-201ENST00000609130 632 ntBASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN4Q96NZ1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 AL031432.3-201ENST00000607698 485 ntBASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 AL355001.2-201ENST00000620617 1191 ntBASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN4Q96NZ1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 EDA-201ENST00000338901 1233 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms