Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 AC104187.1-201ENST00000607510 612 ntBASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC46A1Q96NT5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 KRT87P-202ENST00000534226 1464 ntBASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 AC007322.1-201ENST00000426983 750 ntBASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 DUX4L16-201ENST00000555130 1264 ntBASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 KRT18P6-201ENST00000555540 1265 ntBASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 AC066615.1-201ENST00000640911 628 ntBASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC46A1Q96NT5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC46A1Q96NT5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC46A1Q96NT5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
SLC46A1Q96NT5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC46A1Q96NT5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC46A1Q96NT5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC46A1Q96NT5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC46A1Q96NT5 SLC7A5P2-201ENST00000553010 536 ntBASIC20.64■□□□□ 0.89
SLC46A1Q96NT5 AC005224.4-201ENST00000583262 1652 ntBASIC20.64■□□□□ 0.89
SLC46A1Q96NT5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC46A1Q96NT5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 AC009237.3-201ENST00000393279 1427 ntBASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 AC005181.1-201ENST00000604782 1256 ntBASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A1Q96NT5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 GUSBP6-202ENST00000438529 1198 ntBASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SLC46A1Q96NT5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SLC46A1Q96NT5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms