Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 KRT16P3-201ENST00000439127 1283 ntBASIC22.75■■□□□ 1.23
CALR3Q96L12 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.75■■□□□ 1.23
CALR3Q96L12 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
CALR3Q96L12 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CALR3Q96L12 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CALR3Q96L12 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.75■■□□□ 1.23
CALR3Q96L12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.74■■□□□ 1.23
CALR3Q96L12 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
CALR3Q96L12 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CALR3Q96L12 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.74■■□□□ 1.23
CALR3Q96L12 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 AC005229.4-201ENST00000610085 2198 ntBASIC22.74■■□□□ 1.23
CALR3Q96L12 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CALR3Q96L12 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.74■■□□□ 1.23
CALR3Q96L12 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.73■■□□□ 1.23
CALR3Q96L12 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CALR3Q96L12 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CALR3Q96L12 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CALR3Q96L12 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CALR3Q96L12 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.73■■□□□ 1.23
CALR3Q96L12 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CALR3Q96L12 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.73■■□□□ 1.23
CALR3Q96L12 Z98882.1-201ENST00000622160 2253 ntBASIC22.73■■□□□ 1.23
CALR3Q96L12 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CALR3Q96L12 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
CALR3Q96L12 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.72■■□□□ 1.23
CALR3Q96L12 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CALR3Q96L12 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CALR3Q96L12 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.72■■□□□ 1.23
CALR3Q96L12 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CALR3Q96L12 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CALR3Q96L12 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.72■■□□□ 1.23
CALR3Q96L12 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.72■■□□□ 1.23
CALR3Q96L12 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.72■■□□□ 1.23
CALR3Q96L12 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CALR3Q96L12 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.72■■□□□ 1.23
CALR3Q96L12 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.72■■□□□ 1.23
CALR3Q96L12 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CALR3Q96L12 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CALR3Q96L12 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.71■■□□□ 1.23
CALR3Q96L12 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CALR3Q96L12 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
CALR3Q96L12 AC006455.2-201ENST00000429931 906 ntBASIC22.71■■□□□ 1.23
CALR3Q96L12 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.71■■□□□ 1.23
CALR3Q96L12 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CALR3Q96L12 AL034346.1-201ENST00000568244 1277 ntBASIC22.71■■□□□ 1.23
CALR3Q96L12 AC099791.2-201ENST00000605725 427 ntBASIC22.71■■□□□ 1.23
CALR3Q96L12 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CALR3Q96L12 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CALR3Q96L12 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.71■■□□□ 1.23
CALR3Q96L12 SLC25A24-204ENST00000569674 2357 ntBASIC22.71■■□□□ 1.23
CALR3Q96L12 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.71■■□□□ 1.23
CALR3Q96L12 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
CALR3Q96L12 PKD1P6-201ENST00000343738 4769 ntBASIC22.71■■□□□ 1.23
CALR3Q96L12 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CALR3Q96L12 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CALR3Q96L12 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.7■■□□□ 1.23
CALR3Q96L12 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
CALR3Q96L12 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 AC010141.3-201ENST00000456659 717 ntBASIC22.7■■□□□ 1.22
CALR3Q96L12 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CALR3Q96L12 MIR3181-201ENST00000578512 73 ntBASIC22.7■■□□□ 1.22
CALR3Q96L12 MIR3621-201ENST00000580529 85 ntBASIC22.7■■□□□ 1.22
CALR3Q96L12 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.7■■□□□ 1.22
CALR3Q96L12 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.7■■□□□ 1.22
CALR3Q96L12 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CALR3Q96L12 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.7■■□□□ 1.22
CALR3Q96L12 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CALR3Q96L12 AL121603.2-201ENST00000557373 2117 ntBASIC22.69■■□□□ 1.22
CALR3Q96L12 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CALR3Q96L12 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.69■■□□□ 1.22
CALR3Q96L12 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CALR3Q96L12 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CALR3Q96L12 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CALR3Q96L12 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CALR3Q96L12 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CALR3Q96L12 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CALR3Q96L12 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CALR3Q96L12 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.68■■□□□ 1.22
CALR3Q96L12 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CALR3Q96L12 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CALR3Q96L12 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CALR3Q96L12 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms